Last updated on 2024-05-28 12:56:55 CEST.
| Package | ERROR | WARN | NOTE | OK |
|---|---|---|---|---|
| kde1d | 4 | 9 | ||
| kdevine | 1 | 11 | ||
| RcppThread | 13 | |||
| svines | 2 | 5 | 5 | |
| VC2copula | 13 | |||
| VineCopula | 9 | 3 | ||
| vinereg | 8 | 5 | ||
| wdm | 12 |
Current CRAN status: NOTE: 4, OK: 9
Version: 1.0.7
Check: installed package size
Result: NOTE
installed size is 14.5Mb
sub-directories of 1Mb or more:
libs 14.4Mb
Flavors: r-release-macos-arm64, r-release-macos-x86_64, r-oldrel-macos-arm64, r-oldrel-macos-x86_64
Current CRAN status: ERROR: 1, OK: 11
Version: 0.4.4
Check: examples
Result: ERROR
Running examples in ‘kdevine-Ex.R’ failed
The error most likely occurred in:
> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: dkde1d
> ### Title: Working with a kde1d object
> ### Aliases: dkde1d pkde1d, qkde1d, rkde1d pkde1d qkde1d
>
> ### ** Examples
>
> data(wdbc) # load data
> fit <- kde1d(wdbc[, 5]) # estimate density
> dkde1d(1000, fit) # evaluate density estimate
[1] 0.0003689227
> pkde1d(1000, fit) # evaluate corresponding cdf
[1] 0.8348244
> qkde1d(0.5, fit) # quantile function
*** caught segfault ***
address 0x1, cause 'memory not mapped'
Traceback:
1: eval_qkde1d(sort(obj$x_cc), x, obj$xmin, obj$xmax, obj$bw)
2: qkde1d(0.5, fit)
An irrecoverable exception occurred. R is aborting now ...
Segmentation fault
Flavor: r-devel-linux-x86_64-debian-gcc
Version: 0.4.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [1s/2s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> library(testthat)
> library(kdevine)
The kdevine package is no longer actively developed. Consider using
- the 'kde1d' package for marginal estimation,
- the functions vine() and vinecop() from the 'rvinecopulib'
package as replacements for kdevine() and kdevinecop().
>
> test_check("kdevine")
*** caught segfault ***
address 0x1, cause 'memory not mapped'
Traceback:
1: eval_qkde1d(sort(obj$x_cc), x, obj$xmin, obj$xmax, obj$bw)
2: qkde1d(runif(10), fit)
3: eval_bare(expr, quo_get_env(quo))
4: quasi_label(enquo(object), label, arg = "object")
5: expect_is(qkde1d(runif(10), fit), "ordered")
6: eval(code, test_env)
7: eval(code, test_env)
8: withCallingHandlers({ eval(code, test_env) if (!handled && !is.null(test)) { skip_empty() }}, expectation = handle_expectation, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error)
9: doTryCatch(return(expr), name, parentenv, handler)
10: tryCatchOne(expr, names, parentenv, handlers[[1L]])
11: tryCatchList(expr, names[-nh], parentenv, handlers[-nh])
12: doTryCatch(return(expr), name, parentenv, handler)
13: tryCatchOne(tryCatchList(expr, names[-nh], parentenv, handlers[-nh]), names[nh], parentenv, handlers[[nh]])
14: tryCatchList(expr, classes, parentenv, handlers)
15: tryCatch(withCallingHandlers({ eval(code, test_env) if (!handled && !is.null(test)) { skip_empty() }}, expectation = handle_expectation, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error), error = handle_fatal, skip = function(e) { })
16: test_code(desc, code, env = parent.frame(), default_reporter = local_interactive_reporter())
17: test_that("allows ordered input", { fit <- kde1d(dat$z1) expect_is(dkde1d(data.frame(dat$z1), fit), "numeric") expect_is(pkde1d(data.frame(dat$z1), fit), "numeric") expect_is(qkde1d(runif(10), fit), "ordered") fit <- kde1d(dat$x1) expect_is(qkde1d(runif(10), fit), "numeric") fit <- kdevine(dat[, 2:3]) expect_is(dkdevine(dat[, 2:3], fit), "numeric")})
18: eval(code, test_env)
19: eval(code, test_env)
20: withCallingHandlers({ eval(code, test_env) if (!handled && !is.null(test)) { skip_empty() }}, expectation = handle_expectation, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error)
21: doTryCatch(return(expr), name, parentenv, handler)
22: tryCatchOne(expr, names, parentenv, handlers[[1L]])
23: tryCatchList(expr, names[-nh], parentenv, handlers[-nh])
24: doTryCatch(return(expr), name, parentenv, handler)
25: tryCatchOne(tryCatchList(expr, names[-nh], parentenv, handlers[-nh]), names[nh], parentenv, handlers[[nh]])
26: tryCatchList(expr, classes, parentenv, handlers)
27: tryCatch(withCallingHandlers({ eval(code, test_env) if (!handled && !is.null(test)) { skip_empty() }}, expectation = handle_expectation, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error), error = handle_fatal, skip = function(e) { })
28: test_code(test = NULL, code = exprs, env = env, default_reporter = StopReporter$new())
29: source_file(path, env = env(env), desc = desc, error_call = error_call)
30: FUN(X[[i]], ...)
31: lapply(test_paths, test_one_file, env = env, desc = desc, error_call = error_call)
32: doTryCatch(return(expr), name, parentenv, handler)
33: tryCatchOne(expr, names, parentenv, handlers[[1L]])
34: tryCatchList(expr, classes, parentenv, handlers)
35: tryCatch(code, testthat_abort_reporter = function(cnd) { cat(conditionMessage(cnd), "\n") NULL})
36: with_reporter(reporters$multi, lapply(test_paths, test_one_file, env = env, desc = desc, error_call = error_call))
37: test_files_serial(test_dir = test_dir, test_package = test_package, test_paths = test_paths, load_helpers = load_helpers, reporter = reporter, env = env, stop_on_failure = stop_on_failure, stop_on_warning = stop_on_warning, desc = desc, load_package = load_package, error_call = error_call)
38: test_files(test_dir = path, test_paths = test_paths, test_package = package, reporter = reporter, load_helpers = load_helpers, env = env, stop_on_failure = stop_on_failure, stop_on_warning = stop_on_warning, load_package = load_package, parallel = parallel)
39: test_dir("testthat", package = package, reporter = reporter, ..., load_package = "installed")
40: test_check("kdevine")
An irrecoverable exception occurred. R is aborting now ...
Segmentation fault
Flavor: r-devel-linux-x86_64-debian-gcc
Current CRAN status: OK: 13
Current CRAN status: WARN: 2, NOTE: 5, OK: 5
Version: 0.2.3
Check: installed package size
Result: NOTE
installed size is 5.5Mb
sub-directories of 1Mb or more:
libs 5.0Mb
Flavors: r-devel-linux-x86_64-fedora-clang, r-devel-windows-x86_64, r-release-macos-arm64, r-release-windows-x86_64, r-oldrel-macos-arm64, r-oldrel-macos-x86_64, r-oldrel-windows-x86_64
Version: 0.2.3
Check: whether package can be installed
Result: WARN
Found the following significant warnings:
D:/rtools44/x86_64-w64-mingw32.static.posix/lib/gcc/x86_64-w64-mingw32.static.posix/13.2.0/include/emmintrin.h:169:19: warning: 'void* __builtin_memcpy(void*, const void*, long long unsigned int)' reading 16 or more bytes from a region of size 8 [-Wstringop-overread]
See 'd:/Rcompile/CRANpkg/local/4.5/svines.Rcheck/00install.out' for details.
* used C++ compiler: 'g++.exe (GCC) 13.2.0'
Flavor: r-devel-windows-x86_64
Version: 0.2.3
Check: whether package can be installed
Result: WARN
Found the following significant warnings:
D:/rtools44/x86_64-w64-mingw32.static.posix/lib/gcc/x86_64-w64-mingw32.static.posix/13.2.0/include/emmintrin.h:169:19: warning: 'void* __builtin_memcpy(void*, const void*, long long unsigned int)' reading 16 or more bytes from a region of size 8 [-Wstringop-overread]
See 'd:/Rcompile/CRANpkg/local/4.4/svines.Rcheck/00install.out' for details.
* used C++ compiler: 'g++.exe (GCC) 13.2.0'
Flavor: r-release-windows-x86_64
Current CRAN status: OK: 13
Current CRAN status: NOTE: 9, OK: 3
Version: 2.5.0
Check: Rd files
Result: NOTE
checkRd: (-1) RVineMatrix.Rd:90: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) RVineMatrix.Rd:91: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) RVineMatrix.Rd:92: Lost braces in \itemize; \value handles \item{}{} directly
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-windows-x86_64, r-patched-linux-x86_64, r-release-linux-x86_64, r-release-macos-arm64, r-release-windows-x86_64
Version: 2.5.0
Check: HTML version of manual
Result: NOTE
Found the following HTML validation problems:
RVineClarkeTest.html:56:32 (RVineClarkeTest.Rd:31): Warning: trimming empty <code>
RVineClarkeTest.html:68:32 (RVineClarkeTest.Rd:41): Warning: trimming empty <code>
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-windows-x86_64, r-patched-linux-x86_64, r-release-linux-x86_64, r-release-windows-x86_64
Version: 2.5.0
Check: Rd cross-references
Result: NOTE
Undeclared packages ‘foreach’, ‘copula’ in Rd xrefs
Flavor: r-devel-linux-x86_64-fedora-clang
Current CRAN status: NOTE: 8, OK: 5
Version: 0.10.0
Check: installed package size
Result: NOTE
installed size is 6.4Mb
sub-directories of 1Mb or more:
doc 1.4Mb
libs 4.8Mb
Flavors: r-devel-linux-x86_64-fedora-clang, r-devel-windows-x86_64, r-release-macos-arm64, r-release-macos-x86_64, r-release-windows-x86_64, r-oldrel-macos-arm64, r-oldrel-macos-x86_64, r-oldrel-windows-x86_64
Current CRAN status: OK: 12