CRAN Package Check Results for Maintainer ‘Christopher Jackson <chris.jackson at mrc-bsu.cam.ac.uk>’

Last updated on 2024-05-28 06:59:00 CEST.

Package ERROR WARN NOTE OK
denstrip 12
disbayes 1 11
ecoreg 13
fic 1 2 9
flexsurv 13
MetaAnalyser 12
msm 8 4
voi 9 3

Package denstrip

Current CRAN status: OK: 12

Package disbayes

Current CRAN status: ERROR: 1, NOTE: 11

Version: 1.1.0
Check: for GNU extensions in Makefiles
Result: NOTE GNU make is a SystemRequirements. Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-windows-x86_64, r-release-linux-x86_64, r-release-macos-arm64, r-release-windows-x86_64, r-oldrel-macos-arm64, r-oldrel-macos-x86_64, r-oldrel-windows-x86_64

Version: 1.1.0
Check: installed package size
Result: NOTE installed size is 7.4Mb sub-directories of 1Mb or more: libs 6.6Mb Flavors: r-devel-linux-x86_64-fedora-clang, r-devel-windows-x86_64, r-release-macos-arm64, r-release-windows-x86_64, r-oldrel-macos-arm64, r-oldrel-macos-x86_64, r-oldrel-windows-x86_64

Version: 1.1.0
Check: whether package can be installed
Result: ERROR Installation failed. Flavor: r-patched-linux-x86_64

Package ecoreg

Current CRAN status: OK: 13

Package fic

Current CRAN status: WARN: 1, NOTE: 2, OK: 9

Version: 1.0.0
Check: re-building of vignette outputs
Result: WARN Error(s) in re-building vignettes: ... --- re-building ‘fic.Rnw’ using knitr Error: processing vignette 'fic.Rnw' failed with diagnostics: Running 'texi2dvi' on 'fic.tex' failed. LaTeX errors: ! Undefined control sequence. l.413 \hlkwd{library}\hldef {(}\hlsng{"fic"}\hldef{)} ? ! Emergency stop. ! Emergency stop. l.413 End of file on the terminal! ! ==> Fatal error occurred, no output PDF file produced! --- failed re-building ‘fic.Rnw’ --- re-building ‘linear.Rnw’ using knitr Error: processing vignette 'linear.Rnw' failed with diagnostics: Running 'texi2dvi' on 'linear.tex' failed. LaTeX errors: ! Undefined control sequence. l.102 \hldef {mtcars}\hlopt{$}\hldef{am} \hlkwb{<-} \hlkwd{factor}\hldef{(mtc... ? ! Emergency stop. l.102 End of file on the terminal! ! ==> Fatal error occurred, no output PDF file produced! --- failed re-building ‘linear.Rnw’ --- re-building ‘loss.Rnw’ using knitr Error: processing vignette 'loss.Rnw' failed with diagnostics: Running 'texi2dvi' on 'loss.tex' failed. LaTeX errors: ! Undefined control sequence. l.86 \hlkwd{library}\hldef {(fic)} ? ! Emergency stop. ! Emergency stop. l.86 End of file on the terminal! ! ==> Fatal error occurred, no output PDF file produced! --- failed re-building ‘loss.Rnw’ --- re-building ‘multistate.Rnw’ using knitr Error: processing vignette 'multistate.Rnw' failed with diagnostics: Running 'texi2dvi' on 'multistate.tex' failed. LaTeX errors: ! Undefined control sequence. l.147 \hlkwa{if} \hldef {(}\hlopt{!}\hlkwd{require}\hldef{(}\hlsng{"msm"}\hld... ? ! Emergency stop. l.147 End of file on the terminal! ! ==> Fatal error occurred, no output PDF file produced! --- failed re-building ‘multistate.Rnw’ --- re-building ‘skewnormal.Rnw’ using knitr Error: processing vignette 'skewnormal.Rnw' failed with diagnostics: Running 'texi2dvi' on 'skewnormal.tex' failed. LaTeX errors: ! Undefined control sequence. l.110 \hldef {ldsnorm} \hlkwb{<-} \hlkwa{function}\hldef{(}\hlkwc{x}\hldef{,}... ? ! Emergency stop. l.110 End of file on the terminal! ! ==> Fatal error occurred, no output PDF file produced! --- failed re-building ‘skewnormal.Rnw’ --- re-building ‘survival.Rnw’ using knitr Error: processing vignette 'survival.Rnw' failed with diagnostics: Running 'texi2dvi' on 'survival.tex' failed. LaTeX errors: ! Undefined control sequence. l.97 \hlkwa{if} \hldef {(}\hlopt{!}\hlkwd{require}\hldef{(}\hlsng{"flexsurv"}... ? ! Emergency stop. l.97 End of file on the terminal! ! ==> Fatal error occurred, no output PDF file produced! --- failed re-building ‘survival.Rnw’ SUMMARY: processing the following files failed: ‘fic.Rnw’ ‘linear.Rnw’ ‘loss.Rnw’ ‘multistate.Rnw’ ‘skewnormal.Rnw’ ‘survival.Rnw’ Error: Vignette re-building failed. Execution halted Flavor: r-devel-linux-x86_64-debian-gcc

Version: 1.0.0
Check: dependencies in R code
Result: NOTE Namespace in Imports field not imported from: ‘numDeriv’ All declared Imports should be used. Flavors: r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc

Package flexsurv

Current CRAN status: OK: 13

Package MetaAnalyser

Current CRAN status: OK: 12

Package msm

Current CRAN status: NOTE: 8, OK: 4

Version: 1.7.1
Check: HTML version of manual
Result: NOTE Found the following HTML validation problems: tnorm.html:113:32 (tnorm.Rd:74): Warning: trimming empty <code> Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-windows-x86_64, r-patched-linux-x86_64, r-release-linux-x86_64, r-release-windows-x86_64

Package voi

Current CRAN status: NOTE: 9, OK: 3

Version: 1.0.2
Check: package dependencies
Result: NOTE Package suggested but not available for checking: ‘INLA’ Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-patched-linux-x86_64, r-release-linux-x86_64, r-release-macos-arm64, r-oldrel-macos-arm64, r-oldrel-macos-x86_64, r-oldrel-windows-x86_64

Version: 1.0.2
Check: Rd cross-references
Result: NOTE Package unavailable to check Rd xrefs: ‘INLA’ Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-patched-linux-x86_64, r-release-linux-x86_64, r-release-macos-arm64, r-oldrel-macos-arm64, r-oldrel-macos-x86_64, r-oldrel-windows-x86_64

Version: 1.0.2
Check: installed package size
Result: NOTE installed size is 5.0Mb sub-directories of 1Mb or more: data 2.6Mb Flavor: r-devel-linux-x86_64-fedora-clang

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