dynwrap: Representing and Inferring Single-Cell Trajectories

Provides functionality to infer trajectories from single-cell data, represent them into a common format, and adapt them. Other biological information can also be added, such as cellular grouping, RNA velocity and annotation. Saelens et al. (2019) <doi:10.1038/s41587-019-0071-9>.

Version:	1.2.4
Depends:	R (≥ 3.0.0)
Imports:	assertthat, babelwhale, crayon, dplyr, dynutils (≥ 1.0.3), dynparam, igraph, glue, magrittr, Matrix, methods, purrr, processx, readr, stringr, reshape2, tibble, tidyr, yaml
Suggests:	covr, dyndimred, hdf5r, knitr, pkgload, ranger, rmarkdown, testthat
Published:	2023-07-19
DOI:	10.32614/CRAN.package.dynwrap
Author:	Robrecht Cannoodt [aut, cre] (rcannood), Wouter Saelens [aut] (zouter)
Maintainer:	Robrecht Cannoodt <rcannood at gmail.com>
BugReports:	https://github.com/dynverse/dynwrap/issues
License:	MIT + file LICENSE
URL:	https://github.com/dynverse/dynwrap
NeedsCompilation:	no
Citation:	dynwrap citation info
Materials:	README NEWS
In views:	Omics
CRAN checks:	dynwrap results

Documentation:

Reference manual:	dynwrap.pdf
Vignettes:	Creating a TI method: Container Creating a TI method: Script Creating a TI method: R Creating a TI method: Wrapping trajectories

Downloads:

Package source:	dynwrap_1.2.4.tar.gz
Windows binaries:	r-devel: dynwrap_1.2.4.zip, r-release: dynwrap_1.2.4.zip, r-oldrel: dynwrap_1.2.4.zip
macOS binaries:	r-release (arm64): dynwrap_1.2.4.tgz, r-oldrel (arm64): dynwrap_1.2.4.tgz, r-release (x86_64): dynwrap_1.2.4.tgz, r-oldrel (x86_64): dynwrap_1.2.4.tgz
Old sources:	dynwrap archive

Reverse dependencies:

Reverse imports:	SCORPIUS
Reverse suggests:	dyngen

Linking:

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