Last updated on 2026-03-30 01:51:59 CEST.
| Package | ERROR | OK |
|---|---|---|
| mapi | 2 | 12 |
Current CRAN status: ERROR: 2, OK: 12
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [109s/318s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.596, system: 0.051, elapsed: 2.121 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.487, system: 0.062, elapsed: 11.590 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.222, system: 0.019, elapsed: 0.564 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 6.671, system: 0.728, elapsed: 39.549 seconds]
Computing values for grid cells...
... done. [user: 0.182, system: 0.003, elapsed: 0.185 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 18.751, system: 0.884, elapsed: 54.745 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.614, system: 0.055, elapsed: 1.828 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.723, system: 0.088, elapsed: 12.762 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.220, system: 0.016, elapsed: 0.522 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 6.682, system: 0.687, elapsed: 36.807 seconds]
Computing values for grid cells...
... done. [user: 0.181, system: 0.004, elapsed: 0.202 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 19.001, system: 0.879, elapsed: 52.787 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.574, system: 0.035, elapsed: 4.373 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.620, system: 0.064, elapsed: 21.972 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.222, system: 0.016, elapsed: 1.060 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 6.972, system: 0.835, elapsed: 118.005 seconds]
Computing values for grid cells...
... done. [user: 0.175, system: 0.003, elapsed: 0.179 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
1 2 3 4
... computing probabilities from permuted values ...
... done. [user: 1.272, system: 0.225, elapsed: 1.036 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 20.512, system: 1.221, elapsed: 147.633 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.546, system: 0.032, elapsed: 2.211 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.700, system: 0.070, elapsed: 13.679 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.221, system: 0.018, elapsed: 0.817 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 7.653, system: 0.801, elapsed: 27.411 seconds]
Computing values for grid cells...
... done. [user: 0.180, system: 0.004, elapsed: 0.186 seconds]
Starting 50 permutations...
... serially ...
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... computing probabilities from permuted values ...
... done. [user: 19.808, system: 1.588, elapsed: 11.249 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 39.839, system: 2.543, elapsed: 56.434 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
Saving _problems/test-MAPI_Varicell-15.R
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
Expected `sd(sf::st_area(grid.var))` to equal 963339.563502512.
Differences:
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error:
! Test failures.
Execution halted
Flavor: r-release-macos-x86_64
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [98s/394s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.568, system: 0.041, elapsed: 1.973 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.471, system: 0.078, elapsed: 10.627 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.219, system: 0.017, elapsed: 0.282 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 6.649, system: 0.706, elapsed: 22.507 seconds]
Computing values for grid cells...
... done. [user: 0.189, system: 0.003, elapsed: 0.169 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 18.747, system: 0.877, elapsed: 36.189 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.678, system: 0.046, elapsed: 1.676 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.543, system: 0.068, elapsed: 11.721 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.219, system: 0.016, elapsed: 0.647 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 6.767, system: 0.865, elapsed: 143.273 seconds]
Computing values for grid cells...
... done. [user: 0.163, system: 0.003, elapsed: 0.242 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 19.012, system: 1.025, elapsed: 158.186 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.549, system: 0.032, elapsed: 2.676 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.591, system: 0.057, elapsed: 14.307 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.222, system: 0.018, elapsed: 0.989 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 6.678, system: 0.786, elapsed: 96.172 seconds]
Computing values for grid cells...
... done. [user: 0.171, system: 0.004, elapsed: 0.176 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
1 2 3 4
... computing probabilities from permuted values ...
... done. [user: 1.268, system: 0.318, elapsed: 1.073 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 20.169, system: 1.244, elapsed: 116.384 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.622, system: 0.037, elapsed: 2.117 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.592, system: 0.076, elapsed: 10.987 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.221, system: 0.016, elapsed: 0.512 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 6.367, system: 0.649, elapsed: 22.554 seconds]
Computing values for grid cells...
... done. [user: 0.164, system: 0.004, elapsed: 0.168 seconds]
Starting 50 permutations...
... serially ...
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... computing probabilities from permuted values ...
... done. [user: 11.541, system: 0.634, elapsed: 39.545 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 30.263, system: 1.454, elapsed: 76.646 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
Saving _problems/test-MAPI_Varicell-15.R
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
Expected `sd(sf::st_area(grid.var))` to equal 963339.563502512.
Differences:
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error:
! Test failures.
Execution halted
Flavor: r-oldrel-macos-x86_64