Last updated on 2026-03-12 11:51:18 CET.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 1.1.4 | 15.09 | 314.64 | 329.73 | OK | |
| r-devel-linux-x86_64-debian-gcc | 1.1.4 | 11.05 | 220.75 | 231.80 | OK | |
| r-devel-linux-x86_64-fedora-clang | 1.1.4 | 22.00 | 298.64 | 320.64 | OK | |
| r-devel-linux-x86_64-fedora-gcc | 1.1.4 | 31.00 | 332.12 | 363.12 | OK | |
| r-devel-macos-arm64 | 1.1.4 | 3.00 | 44.00 | 47.00 | OK | |
| r-devel-windows-x86_64 | 1.1.4 | 23.00 | 197.00 | 220.00 | OK | |
| r-patched-linux-x86_64 | 1.1.4 | 14.31 | 344.24 | 358.55 | OK | |
| r-release-linux-x86_64 | 1.1.4 | 14.58 | 340.41 | 354.99 | OK | |
| r-release-macos-arm64 | 1.1.4 | OK | ||||
| r-release-macos-x86_64 | 1.1.4 | 11.00 | 281.00 | 292.00 | ERROR | |
| r-release-windows-x86_64 | 1.1.4 | 20.00 | 186.00 | 206.00 | OK | |
| r-oldrel-macos-arm64 | 1.1.4 | OK | ||||
| r-oldrel-macos-x86_64 | 1.1.4 | 10.00 | 492.00 | 502.00 | ERROR | |
| r-oldrel-windows-x86_64 | 1.1.4 | 24.00 | 247.00 | 271.00 | OK |
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [101s/239s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.572, system: 0.043, elapsed: 1.920 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.696, system: 0.099, elapsed: 12.629 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.216, system: 0.016, elapsed: 0.681 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 8.626, system: 0.904, elapsed: 14.045 seconds]
Computing values for grid cells...
... done. [user: 0.182, system: 0.005, elapsed: 0.176 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 20.948, system: 1.099, elapsed: 30.325 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.768, system: 0.052, elapsed: 1.580 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.671, system: 0.100, elapsed: 11.522 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.219, system: 0.015, elapsed: 0.403 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 6.661, system: 0.660, elapsed: 37.392 seconds]
Computing values for grid cells...
... done. [user: 0.182, system: 0.004, elapsed: 0.216 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 19.256, system: 0.872, elapsed: 51.726 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.554, system: 0.032, elapsed: 2.108 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.700, system: 0.103, elapsed: 13.018 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.220, system: 0.015, elapsed: 0.474 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 7.013, system: 0.699, elapsed: 16.070 seconds]
Computing values for grid cells...
... done. [user: 0.173, system: 0.003, elapsed: 0.187 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
1 2 3 4
... computing probabilities from permuted values ...
... done. [user: 1.309, system: 0.248, elapsed: 1.097 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 20.643, system: 1.139, elapsed: 33.942 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.571, system: 0.036, elapsed: 1.932 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.658, system: 0.095, elapsed: 12.013 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.221, system: 0.017, elapsed: 0.466 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 6.776, system: 0.735, elapsed: 62.587 seconds]
Computing values for grid cells...
... done. [user: 0.177, system: 0.003, elapsed: 0.198 seconds]
Starting 50 permutations...
... serially ...
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... computing probabilities from permuted values ...
... done. [user: 11.561, system: 0.623, elapsed: 38.648 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 30.673, system: 1.542, elapsed: 116.794 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
Saving _problems/test-MAPI_Varicell-15.R
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
Expected `sd(sf::st_area(grid.var))` to equal 963339.563502512.
Differences:
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error:
! Test failures.
Execution halted
Flavor: r-release-macos-x86_64
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [102s/442s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.611, system: 0.056, elapsed: 2.282 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.526, system: 0.074, elapsed: 11.930 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.217, system: 0.017, elapsed: 0.956 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 6.690, system: 0.691, elapsed: 34.461 seconds]
Computing values for grid cells...
... done. [user: 0.169, system: 0.003, elapsed: 0.196 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 18.808, system: 0.863, elapsed: 50.585 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.570, system: 0.031, elapsed: 2.533 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.640, system: 0.092, elapsed: 18.755 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.219, system: 0.014, elapsed: 0.604 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 6.938, system: 0.839, elapsed: 132.031 seconds]
Computing values for grid cells...
... done. [user: 0.169, system: 0.003, elapsed: 0.352 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 19.085, system: 1.001, elapsed: 155.114 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.627, system: 0.036, elapsed: 4.278 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.453, system: 0.067, elapsed: 18.628 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.215, system: 0.016, elapsed: 1.050 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 6.738, system: 0.776, elapsed: 118.072 seconds]
Computing values for grid cells...
... done. [user: 0.176, system: 0.005, elapsed: 0.182 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
1 2 3 4
... computing probabilities from permuted values ...
... done. [user: 1.273, system: 0.313, elapsed: 1.053 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 20.132, system: 1.240, elapsed: 144.334 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.540, system: 0.033, elapsed: 2.346 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.524, system: 0.066, elapsed: 24.794 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.216, system: 0.016, elapsed: 1.184 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 8.630, system: 0.803, elapsed: 30.721 seconds]
Computing values for grid cells...
... done. [user: 0.164, system: 0.004, elapsed: 0.237 seconds]
Starting 50 permutations...
... serially ...
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... computing probabilities from permuted values ...
... done. [user: 12.751, system: 0.690, elapsed: 25.380 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 33.501, system: 1.641, elapsed: 85.804 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
Saving _problems/test-MAPI_Varicell-15.R
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
Expected `sd(sf::st_area(grid.var))` to equal 963339.563502512.
Differences:
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error:
! Test failures.
Execution halted
Flavor: r-oldrel-macos-x86_64