Last updated on 2026-01-09 05:50:27 CET.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 1.1.4 | 13.04 | 246.46 | 259.50 | OK | |
| r-devel-linux-x86_64-debian-gcc | 1.1.4 | 10.46 | 331.31 | 341.77 | OK | |
| r-devel-linux-x86_64-fedora-clang | 1.1.4 | 25.00 | 289.70 | 314.70 | OK | |
| r-devel-linux-x86_64-fedora-gcc | 1.1.4 | 27.00 | 350.69 | 377.69 | OK | |
| r-devel-windows-x86_64 | 1.1.4 | 20.00 | 194.00 | 214.00 | OK | |
| r-patched-linux-x86_64 | 1.1.4 | 14.99 | 276.36 | 291.35 | OK | |
| r-release-linux-x86_64 | 1.1.4 | 15.05 | 254.30 | 269.35 | OK | |
| r-release-macos-arm64 | 1.1.4 | OK | ||||
| r-release-macos-x86_64 | 1.1.4 | 10.00 | 351.00 | 361.00 | ERROR | |
| r-release-windows-x86_64 | 1.1.4 | 20.00 | 190.00 | 210.00 | OK | |
| r-oldrel-macos-arm64 | 1.1.4 | OK | ||||
| r-oldrel-macos-x86_64 | 1.1.4 | 10.00 | 314.00 | 324.00 | ERROR | |
| r-oldrel-windows-x86_64 | 1.1.4 | 23.00 | 248.00 | 271.00 | OK |
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [97s/303s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.598, system: 0.042, elapsed: 2.485 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.407, system: 0.058, elapsed: 12.796 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.214, system: 0.018, elapsed: 0.711 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 6.744, system: 0.759, elapsed: 52.353 seconds]
Computing values for grid cells...
... done. [user: 0.173, system: 0.003, elapsed: 0.272 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 18.716, system: 0.903, elapsed: 69.532 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.561, system: 0.036, elapsed: 2.473 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.553, system: 0.073, elapsed: 13.639 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.217, system: 0.016, elapsed: 0.528 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 6.757, system: 0.699, elapsed: 44.888 seconds]
Computing values for grid cells...
... done. [user: 0.184, system: 0.007, elapsed: 0.202 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 18.864, system: 0.859, elapsed: 62.647 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.563, system: 0.034, elapsed: 2.072 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.525, system: 0.080, elapsed: 20.372 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.222, system: 0.017, elapsed: 1.217 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 6.464, system: 0.640, elapsed: 38.900 seconds]
Computing values for grid cells...
... done. [user: 0.169, system: 0.003, elapsed: 0.176 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
1 2 3 4
... computing probabilities from permuted values ...
... done. [user: 1.232, system: 0.231, elapsed: 1.040 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 19.856, system: 1.048, elapsed: 64.918 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.606, system: 0.039, elapsed: 2.241 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.503, system: 0.073, elapsed: 11.632 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.217, system: 0.016, elapsed: 0.305 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 6.650, system: 0.700, elapsed: 51.340 seconds]
Computing values for grid cells...
... done. [user: 0.178, system: 0.003, elapsed: 0.209 seconds]
Starting 50 permutations...
... serially ...
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... computing probabilities from permuted values ...
... done. [user: 11.410, system: 0.605, elapsed: 31.809 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 30.268, system: 1.462, elapsed: 98.512 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
Saving _problems/test-MAPI_Varicell-15.R
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
Expected `sd(sf::st_area(grid.var))` to equal 963339.563502512.
Differences:
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error:
! Test failures.
Execution halted
Flavor: r-release-macos-x86_64
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [86s/225s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.675, system: 0.046, elapsed: 4.734 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.628, system: 0.053, elapsed: 26.664 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.200, system: 0.016, elapsed: 0.558 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 4.267, system: 0.432, elapsed: 12.473 seconds]
Computing values for grid cells...
... done. [user: 0.172, system: 0.004, elapsed: 0.459 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 16.520, system: 0.574, elapsed: 46.545 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.595, system: 0.033, elapsed: 4.080 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.482, system: 0.053, elapsed: 25.255 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.201, system: 0.015, elapsed: 0.574 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 4.291, system: 0.418, elapsed: 13.024 seconds]
Computing values for grid cells...
... done. [user: 0.170, system: 0.003, elapsed: 0.433 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 16.306, system: 0.542, elapsed: 44.900 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.549, system: 0.031, elapsed: 3.891 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.550, system: 0.061, elapsed: 25.220 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.200, system: 0.013, elapsed: 0.542 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 4.305, system: 0.414, elapsed: 12.002 seconds]
Computing values for grid cells...
... done. [user: 0.166, system: 0.003, elapsed: 0.431 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
1 2 3 4
... computing probabilities from permuted values ...
... done. [user: 1.156, system: 0.241, elapsed: 1.957 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 17.589, system: 0.786, elapsed: 45.699 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.613, system: 0.035, elapsed: 4.473 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.541, system: 0.059, elapsed: 25.625 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.203, system: 0.015, elapsed: 0.536 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 4.270, system: 0.425, elapsed: 12.165 seconds]
Computing values for grid cells...
... done. [user: 0.172, system: 0.005, elapsed: 0.436 seconds]
Starting 50 permutations...
... serially ...
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... computing probabilities from permuted values ...
... done. [user: 10.646, system: 0.525, elapsed: 29.132 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 27.115, system: 1.090, elapsed: 74.125 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
Saving _problems/test-MAPI_Varicell-15.R
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
Expected `sd(sf::st_area(grid.var))` to equal 963339.563502512.
Differences:
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error:
! Test failures.
Execution halted
Flavor: r-oldrel-macos-x86_64