Last updated on 2025-11-04 11:52:35 CET.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 1.1.4 | 12.73 | 259.99 | 272.72 | OK | |
| r-devel-linux-x86_64-debian-gcc | 1.1.4 | 10.06 | 236.55 | 246.61 | OK | |
| r-devel-linux-x86_64-fedora-clang | 1.1.4 | 33.00 | 275.91 | 308.91 | OK | |
| r-devel-linux-x86_64-fedora-gcc | 1.1.4 | 32.00 | 335.72 | 367.72 | OK | |
| r-devel-windows-x86_64 | 1.1.4 | 22.00 | 187.00 | 209.00 | OK | |
| r-patched-linux-x86_64 | 1.1.4 | 13.09 | 247.00 | 260.09 | OK | |
| r-release-linux-x86_64 | 1.1.4 | 15.44 | 269.38 | 284.82 | OK | |
| r-release-macos-arm64 | 1.1.4 | 6.00 | 96.00 | 102.00 | OK | |
| r-release-macos-x86_64 | 1.1.4 | 12.00 | 185.00 | 197.00 | ERROR | |
| r-release-windows-x86_64 | 1.1.4 | 20.00 | 187.00 | 207.00 | OK | |
| r-oldrel-macos-arm64 | 1.1.4 | 6.00 | 92.00 | 98.00 | OK | |
| r-oldrel-macos-x86_64 | 1.1.4 | 10.00 | 169.00 | 179.00 | ERROR | |
| r-oldrel-windows-x86_64 | 1.1.4 | 25.00 | 239.00 | 264.00 | OK |
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [87s/131s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.664, system: 0.060, elapsed: 2.413 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.606, system: 0.202, elapsed: 13.343 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.203, system: 0.020, elapsed: 0.274 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 4.154, system: 0.294, elapsed: 5.364 seconds]
Computing values for grid cells...
... done. [user: 0.187, system: 0.010, elapsed: 0.249 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 16.372, system: 0.616, elapsed: 22.428 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.806, system: 0.086, elapsed: 2.457 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.696, system: 0.284, elapsed: 13.828 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.204, system: 0.019, elapsed: 0.431 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 4.025, system: 0.225, elapsed: 8.127 seconds]
Computing values for grid cells...
... done. [user: 0.177, system: 0.006, elapsed: 0.268 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 16.464, system: 0.647, elapsed: 25.982 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.747, system: 0.061, elapsed: 3.244 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.836, system: 0.344, elapsed: 13.857 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.204, system: 0.020, elapsed: 0.340 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 4.208, system: 0.337, elapsed: 6.553 seconds]
Computing values for grid cells...
... done. [user: 0.183, system: 0.011, elapsed: 0.280 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
1 2 3 4
... computing probabilities from permuted values ...
... done. [user: 1.330, system: 0.282, elapsed: 1.399 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 18.159, system: 1.094, elapsed: 26.648 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.655, system: 0.050, elapsed: 2.824 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.542, system: 0.169, elapsed: 18.207 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.200, system: 0.013, elapsed: 0.611 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 4.113, system: 0.210, elapsed: 7.817 seconds]
Computing values for grid cells...
... done. [user: 0.177, system: 0.005, elapsed: 0.265 seconds]
Starting 50 permutations...
... serially ...
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... computing probabilities from permuted values ...
... done. [user: 11.055, system: 0.542, elapsed: 17.186 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 27.404, system: 1.033, elapsed: 48.206 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
sd(sf::st_area(grid.var)) (`actual`) not equal to 963339.563502512 (`expected`).
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error: Test failures
Execution halted
Flavor: r-release-macos-x86_64
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [84s/119s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.813, system: 0.082, elapsed: 2.863 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.666, system: 0.278, elapsed: 14.019 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.200, system: 0.019, elapsed: 0.376 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.890, system: 0.280, elapsed: 5.918 seconds]
Computing values for grid cells...
... done. [user: 0.184, system: 0.010, elapsed: 0.230 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 16.300, system: 0.702, elapsed: 24.219 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.819, system: 0.081, elapsed: 2.114 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.447, system: 0.294, elapsed: 10.869 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.196, system: 0.016, elapsed: 0.221 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.756, system: 0.242, elapsed: 4.396 seconds]
Computing values for grid cells...
... done. [user: 0.175, system: 0.011, elapsed: 0.210 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 15.932, system: 0.691, elapsed: 18.466 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.766, system: 0.102, elapsed: 2.644 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.635, system: 0.182, elapsed: 14.928 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.193, system: 0.012, elapsed: 0.209 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.610, system: 0.171, elapsed: 4.172 seconds]
Computing values for grid cells...
... done. [user: 0.181, system: 0.020, elapsed: 0.246 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
1 2 4 3
... computing probabilities from permuted values ...
... done. [user: 1.077, system: 0.247, elapsed: 0.834 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 17.082, system: 0.778, elapsed: 23.856 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.610, system: 0.039, elapsed: 2.102 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.478, system: 0.091, elapsed: 16.860 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.190, system: 0.012, elapsed: 0.340 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.847, system: 0.180, elapsed: 6.910 seconds]
Computing values for grid cells...
... done. [user: 0.180, system: 0.004, elapsed: 0.293 seconds]
Starting 50 permutations...
... serially ...
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... computing probabilities from permuted values ...
... done. [user: 10.785, system: 0.471, elapsed: 16.584 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 26.749, system: 0.822, elapsed: 44.066 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
sd(sf::st_area(grid.var)) (`actual`) not equal to 963339.563502512 (`expected`).
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error: Test failures
Execution halted
Flavor: r-oldrel-macos-x86_64