Last updated on 2026-05-16 12:52:29 CEST.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 1.1.4 | 15.66 | 289.07 | 304.73 | OK | |
| r-devel-linux-x86_64-debian-gcc | 1.1.4 | 19.35 | 253.05 | 272.40 | OK | |
| r-devel-linux-x86_64-fedora-clang | 1.1.4 | 23.00 | 305.60 | 328.60 | OK | |
| r-devel-linux-x86_64-fedora-gcc | 1.1.4 | 30.00 | 335.06 | 365.06 | OK | |
| r-devel-windows-x86_64 | 1.1.4 | 21.00 | 202.00 | 223.00 | OK | |
| r-patched-linux-x86_64 | 1.1.4 | 16.52 | 325.95 | 342.47 | OK | |
| r-release-linux-x86_64 | 1.1.4 | 15.09 | 334.52 | 349.61 | OK | |
| r-release-macos-arm64 | 1.1.4 | 4.00 | 45.00 | 49.00 | OK | |
| r-release-macos-x86_64 | 1.1.4 | 10.00 | 613.00 | 623.00 | ERROR | |
| r-release-windows-x86_64 | 1.1.4 | 22.00 | 184.00 | 206.00 | OK | |
| r-oldrel-macos-arm64 | 1.1.4 | OK | ||||
| r-oldrel-macos-x86_64 | 1.1.4 | 10.00 | 341.00 | 351.00 | ERROR | |
| r-oldrel-windows-x86_64 | 1.1.4 | 25.00 | 245.00 | 270.00 | OK |
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [102s/555s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Attaching package: 'data.table'
The following object is masked from 'package:base':
%notin%
Linking to GEOS 3.14.1, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.559, system: 0.041, elapsed: 2.520 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.514, system: 0.068, elapsed: 14.613 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.218, system: 0.018, elapsed: 1.014 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 7.307, system: 0.828, elapsed: 107.650 seconds]
Computing values for grid cells...
... done. [user: 0.195, system: 0.007, elapsed: 0.191 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 19.461, system: 0.997, elapsed: 126.918 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.725, system: 0.049, elapsed: 2.162 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.371, system: 0.062, elapsed: 12.732 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.220, system: 0.014, elapsed: 0.324 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 8.311, system: 0.763, elapsed: 63.367 seconds]
Computing values for grid cells...
... done. [user: 0.185, system: 0.005, elapsed: 0.188 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 20.650, system: 0.962, elapsed: 79.409 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.623, system: 0.044, elapsed: 2.810 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.548, system: 0.059, elapsed: 16.367 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.228, system: 0.014, elapsed: 1.077 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 7.194, system: 0.819, elapsed: 125.239 seconds]
Computing values for grid cells...
... done. [user: 0.174, system: 0.003, elapsed: 0.252 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
1 2 3 4
... computing probabilities from permuted values ...
... done. [user: 1.269, system: 0.245, elapsed: 1.275 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 20.721, system: 1.218, elapsed: 148.009 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.514, system: 0.031, elapsed: 2.598 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.613, system: 0.058, elapsed: 14.394 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.229, system: 0.017, elapsed: 1.000 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 7.188, system: 0.867, elapsed: 131.475 seconds]
Computing values for grid cells...
... done. [user: 0.171, system: 0.002, elapsed: 0.187 seconds]
Starting 50 permutations...
... serially ...
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... computing probabilities from permuted values ...
... done. [user: 11.751, system: 0.641, elapsed: 40.138 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 31.160, system: 1.642, elapsed: 190.856 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
Saving _problems/test-MAPI_Varicell-15.R
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
Expected `sd(sf::st_area(grid.var))` to equal 963339.563502512.
Differences:
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error:
! Test failures.
Execution halted
Flavor: r-release-macos-x86_64
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [103s/295s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.14.1, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.564, system: 0.048, elapsed: 1.757 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.691, system: 0.156, elapsed: 12.844 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.213, system: 0.017, elapsed: 0.648 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 8.146, system: 0.861, elapsed: 13.387 seconds]
Computing values for grid cells...
... done. [user: 0.175, system: 0.005, elapsed: 0.204 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 20.372, system: 1.115, elapsed: 29.558 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.686, system: 0.060, elapsed: 2.114 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.212, system: 0.083, elapsed: 9.678 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.296, system: 0.025, elapsed: 0.237 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 8.159, system: 0.840, elapsed: 62.549 seconds]
Computing values for grid cells...
... done. [user: 0.173, system: 0.003, elapsed: 0.182 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 20.199, system: 1.046, elapsed: 75.399 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.580, system: 0.037, elapsed: 2.317 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.524, system: 0.111, elapsed: 10.647 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.346, system: 0.020, elapsed: 0.412 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 7.161, system: 0.799, elapsed: 90.564 seconds]
Computing values for grid cells...
... done. [user: 0.187, system: 0.004, elapsed: 0.451 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
1 2 4 3
... computing probabilities from permuted values ...
... done. [user: 1.426, system: 0.369, elapsed: 2.426 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 21.122, system: 1.382, elapsed: 108.261 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.524, system: 0.032, elapsed: 3.855 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.680, system: 0.075, elapsed: 20.892 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.221, system: 0.015, elapsed: 0.834 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 6.936, system: 0.713, elapsed: 31.771 seconds]
Computing values for grid cells...
... done. [user: 0.169, system: 0.003, elapsed: 0.180 seconds]
Starting 50 permutations...
... serially ...
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... computing probabilities from permuted values ...
... done. [user: 11.544, system: 0.606, elapsed: 16.698 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 30.791, system: 1.473, elapsed: 75.488 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
Saving _problems/test-MAPI_Varicell-15.R
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
Expected `sd(sf::st_area(grid.var))` to equal 963339.563502512.
Differences:
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error:
! Test failures.
Execution halted
Flavor: r-oldrel-macos-x86_64