tsiR: An Implementation of the TSIR Model

An implementation of the time-series Susceptible-Infected-Recovered (TSIR) model using a number of different fitting options for infectious disease time series data. The manuscript based on this package can be found here <doi:10.1371/journal.pone.0185528>. The method implemented here is described by Finkenstadt and Grenfell (2000) <doi:10.1111/1467-9876.00187>.

Version:	0.4.3
Depends:	R (≥ 3.1.0)
Imports:	ggplot2, kernlab, reshape2, grid
Published:	2021-01-20
DOI:	10.32614/CRAN.package.tsiR
Author:	Alexander D. Becker [aut, cre], Sinead E. Morris [ctb], Ottar N. Bjornstad [ctb]
Maintainer:	Alexander D. Becker <adbecker at princeton.edu>
Contact:	adbecker at princeton dot edu
License:	GPL-3
NeedsCompilation:	no
Materials:	README
In views:	Epidemiology
CRAN checks:	tsiR results

Documentation:

Reference manual:

tsiR.pdf

Downloads:

Package source:	tsiR_0.4.3.tar.gz
Windows binaries:	r-devel: tsiR_0.4.3.zip, r-release: tsiR_0.4.3.zip, r-oldrel: tsiR_0.4.3.zip
macOS binaries:	r-release (arm64): tsiR_0.4.3.tgz, r-oldrel (arm64): tsiR_0.4.3.tgz, r-release (x86_64): tsiR_0.4.3.tgz, r-oldrel (x86_64): tsiR_0.4.3.tgz
Old sources:	tsiR archive

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