rtransparency: Identifies Indicators of Transparency

Use this package to identify indicators of transparency within the published literature. It can identify and extract text related to indicators of transparency from specifically formatted TXT files and from PMC XML files (i.e. XML files downloaded from the PubMed Central). It builds on the original 'rtransparent' tool of Serghiou et al. (2021) <doi:10.1371/journal.pbio.3001107>.

Version:	1.0.0
Depends:	R (≥ 3.5.0)
Imports:	dplyr, magrittr, purrr, readr, rlang, stringr, tibble, tidyselect, utf8, xml2
Suggests:	furrr, future, ggplot2, knitr, readxl, rmarkdown, testthat (≥ 3.0.0)
Published:	2026-07-01
DOI:	10.32614/CRAN.package.rtransparency (may not be active yet)
Author:	Stylianos Serghiou [aut], Ahmad Sofi-Mahmudi [cre, aut]
Maintainer:	Ahmad Sofi-Mahmudi <a.sofimahmudi at gmail.com>
BugReports:	https://github.com/choxos/rtransparency/issues
License:	GPL-3
URL:	https://github.com/choxos/rtransparency, https://choxos.github.io/rtransparency/
NeedsCompilation:	no
Citation:	rtransparency citation info
Materials:	README, NEWS
CRAN checks:	rtransparency results

Documentation:

Reference manual:	rtransparency.html , rtransparency.pdf
Vignettes:	Detecting disclosure of generative-AI use (source, R code) Introduction to rtransparency (source, R code) Scope and limitations (source, R code) Summarizing transparency across a corpus (source, R code)

Downloads:

Package source:	rtransparency_1.0.0.tar.gz
Windows binaries:	r-devel: not available, r-release: not available, r-oldrel: not available
macOS binaries:	r-release (arm64): rtransparency_1.0.0.tgz, r-oldrel (arm64): rtransparency_1.0.0.tgz, r-release (x86_64): rtransparency_1.0.0.tgz, r-oldrel (x86_64): rtransparency_1.0.0.tgz

Linking:

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