pedbuildr: Pedigree Reconstruction

Reconstruct pedigrees from genotype data, by optimising the likelihood over all possible pedigrees subject to given restrictions. Tailor-made plots facilitate evaluation of the output. This package is part of the 'pedsuite' ecosystem for pedigree analysis. In particular, it imports 'pedprobr' for calculating pedigree likelihoods and 'forrel' for estimating pairwise relatedness.

Version:	0.3.0
Depends:	pedtools (≥ 2.2.0), R (≥ 4.1.0)
Imports:	forrel (≥ 1.5.0), glue, pedmut, pedprobr, ribd
Suggests:	testthat
Published:	2023-08-22
DOI:	10.32614/CRAN.package.pedbuildr
Author:	Magnus Dehli Vigeland [aut, cre]
Maintainer:	Magnus Dehli Vigeland <m.d.vigeland at medisin.uio.no>
BugReports:	https://github.com/magnusdv/pedbuildr/issues
License:	GPL-3
URL:	https://github.com/magnusdv/pedbuildr
NeedsCompilation:	no
Language:	en-GB
Citation:	pedbuildr citation info
Materials:	README NEWS
CRAN checks:	pedbuildr results

Documentation:

Reference manual:

pedbuildr.pdf

Downloads:

Package source:	pedbuildr_0.3.0.tar.gz
Windows binaries:	r-devel: pedbuildr_0.3.0.zip, r-release: pedbuildr_0.3.0.zip, r-oldrel: pedbuildr_0.3.0.zip
macOS binaries:	r-release (arm64): pedbuildr_0.3.0.tgz, r-oldrel (arm64): pedbuildr_0.3.0.tgz, r-release (x86_64): pedbuildr_0.3.0.tgz, r-oldrel (x86_64): pedbuildr_0.3.0.tgz
Old sources:	pedbuildr archive

Reverse dependencies:

Reverse imports:

pedsuite

Linking:

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