grantham: Calculate the Grantham Distance

A minimal set of routines to calculate the Grantham distance <doi:10.1126/science.185.4154.862>. The Grantham distance attempts to provide a proxy for the evolutionary distance between two amino acids based on three key chemical properties: composition, polarity and molecular volume. In turn, evolutionary distance is used as a proxy for the impact of missense mutations. The higher the distance, the more deleterious the substitution is expected to be.

Version:	0.1.2
Depends:	R (≥ 2.10)
Imports:	tibble, vctrs, dplyr
Suggests:	spelling, testthat (≥ 3.0.0)
Published:	2024-07-30
DOI:	10.32614/CRAN.package.grantham
Author:	Ramiro Magno [aut, cre], Isabel Duarte [aut], Ana-Teresa Maia [aut], University of Algarve [fnd], CINTESIS [fnd], Pattern Institute [cph, fnd]
Maintainer:	Ramiro Magno <rmagno at pattern.institute>
BugReports:	https://github.com/patterninstitute/grantham/issues
License:	MIT + file LICENSE
URL:	https://www.pattern.institute/grantham/, https://github.com/patterninstitute/grantham
NeedsCompilation:	no
Language:	en-US
Materials:	README NEWS
CRAN checks:	grantham results

Documentation:

Reference manual:

grantham.pdf

Downloads:

Package source:	grantham_0.1.2.tar.gz
Windows binaries:	r-devel: grantham_0.1.2.zip, r-release: grantham_0.1.2.zip, r-oldrel: grantham_0.1.2.zip
macOS binaries:	r-release (arm64): grantham_0.1.2.tgz, r-oldrel (arm64): grantham_0.1.2.tgz, r-release (x86_64): grantham_0.1.2.tgz, r-oldrel (x86_64): grantham_0.1.2.tgz
Old sources:	grantham archive

Reverse dependencies:

Reverse imports:

agvgd

Linking:

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