cfr: Estimate Disease Severity and Case Ascertainment

Estimate the severity of a disease and ascertainment of cases, as discussed in Nishiura et al. (2009) <doi:10.1371/journal.pone.0006852>.

Version:	0.1.2
Depends:	R (≥ 3.5.0)
Imports:	checkmate, stats
Suggests:	bookdown, data.table, distcrete, distributional, dplyr, forcats, ggplot2, incidence2, knitr, purrr, rmarkdown, scales, spelling, testthat (≥ 3.0.0), tidyr
Published:	2024-09-26
DOI:	10.32614/CRAN.package.cfr
Author:	Pratik R. Gupte [aut, cph], Adam Kucharski [aut, cph, cre], Tim Russell [aut, cph], Joshua W. Lambert [rev], Hugo Gruson [rev], Tim Taylor [rev], James M. Azam [rev], Abdoelnaser M. Degoot [rev], Sebastian Funk [rev]
Maintainer:	Adam Kucharski <adam.kucharski at lshtm.ac.uk>
BugReports:	https://github.com/epiverse-trace/cfr/issues
License:	MIT + file LICENSE
URL:	https://github.com/epiverse-trace/cfr, https://epiverse-trace.github.io/cfr/
NeedsCompilation:	no
Language:	en-GB
Materials:	README NEWS
In views:	Epidemiology
CRAN checks:	cfr results

Documentation:

Reference manual:

cfr.pdf

Vignettes:

Estimating disease severity while correcting for reporting delays (source, R code) Handling data from {incidence2} (source, R code) A primer on working with delay distributions (source, R code) Estimating the proportion of cases that are ascertained during an outbreak (source, R code) Calculating a static, delay-adjusted estimate of disease severity (source, R code) Estimating how disease severity varies over the course of an outbreak (source, R code) Software permissions and regulations (source, R code)

Downloads:

Package source:	cfr_0.1.2.tar.gz
Windows binaries:	r-devel: cfr_0.1.2.zip, r-release: cfr_0.1.2.zip, r-oldrel: cfr_0.1.2.zip
macOS binaries:	r-release (arm64): cfr_0.1.2.tgz, r-oldrel (arm64): cfr_0.1.2.tgz, r-release (x86_64): cfr_0.1.2.tgz, r-oldrel (x86_64): cfr_0.1.2.tgz
Old sources:	cfr archive

Linking:

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