cati: Community Assembly by Traits: Individuals and Beyond

Detect and quantify community assembly processes using trait values of individuals or populations, the T-statistics and other metrics, and dedicated null models. Provides tools to analyse 'intraspecific' trait variability and its consequences for community assembly. Implements a framework using individual-level trait data to decompose variance at the population, species, and community levels. Methods are described in 'Taudiere' and 'Violle' (2016) <doi:10.1111/ecog.01433>.

Version: 0.99.6
Depends: R (≥ 3.5.0), nlme, ade4, ape
Imports: e1071, rasterVis, hypervolume, cluster, geometry, vegan
Suggests: lattice, entropart, fBasics, picante, mice, knitr, testthat (≥ 3.0.0)
Published: 2026-03-31
DOI: 10.32614/CRAN.package.cati
Author: Adrien Taudiere ORCID iD [aut, cre, cph], Cyrille Violle ORCID iD [aut], François Munoz ORCID iD [ctb]
Maintainer: Adrien Taudiere <adrien.taudiere at zaclys.net>
BugReports: https://github.com/adrientaudiere/cati/issues
License: GPL-2 | GPL-3 [expanded from: GPL (≥ 2)]
URL: https://github.com/adrientaudiere/cati, https://adrientaudiere.github.io/cati/
NeedsCompilation: no
Language: en-US
Citation: cati citation info
Materials: README, NEWS
CRAN checks: cati results

Documentation:

Reference manual: cati.html , cati.pdf

Downloads:

Package source: cati_0.99.6.tar.gz
Windows binaries: r-devel: cati_0.99.6.zip, r-release: cati_0.99.4.zip, r-oldrel: cati_0.99.4.zip
macOS binaries: r-release (arm64): cati_0.99.6.tgz, r-oldrel (arm64): cati_0.99.4.tgz, r-release (x86_64): cati_0.99.6.tgz, r-oldrel (x86_64): cati_0.99.6.tgz
Old sources: cati archive

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