apex: Phylogenetic Methods for Multiple Gene Data

Toolkit for the analysis of multiple gene data (Jombart et al. 2017) <doi:10.1111/1755-0998.12567>. 'apex' implements the new S4 classes 'multidna', 'multiphyDat' and associated methods to handle aligned DNA sequences from multiple genes.

Version:	1.0.6
Depends:	R (≥ 3.1.3), methods, ape, phangorn
Imports:	utils, graphics, stats, adegenet
Suggests:	testthat, knitr, rmarkdown
Published:	2024-01-31
DOI:	10.32614/CRAN.package.apex
Author:	Klaus Schliep [aut, cre], Thibaut Jombart [aut], Zhian Namir Kamvar [aut], Eric Archer [aut], Rebecca Harris [aut]
Maintainer:	Klaus Schliep <klaus.schliep at gmail.com>
BugReports:	https://github.com/thibautjombart/apex/issues
License:	GPL-2 | GPL-3 [expanded from: GPL (≥ 2)]
URL:	https://github.com/thibautjombart/apex
NeedsCompilation:	no
Materials:	README NEWS
In views:	Phylogenetics
CRAN checks:	apex results

Documentation:

Reference manual:	apex.pdf
Vignettes:	apex: Phylogenetic Methods for Multiple Gene Data.

Downloads:

Package source:	apex_1.0.6.tar.gz
Windows binaries:	r-devel: apex_1.0.6.zip, r-release: apex_1.0.6.zip, r-oldrel: apex_1.0.6.zip
macOS binaries:	r-release (arm64): apex_1.0.6.tgz, r-oldrel (arm64): apex_1.0.6.tgz, r-release (x86_64): apex_1.0.6.tgz, r-oldrel (x86_64): apex_1.0.6.tgz
Old sources:	apex archive

Reverse dependencies:

Reverse suggests:

phangorn

Linking:

Please use the canonical form https://CRAN.R-project.org/package=apex to link to this page.