MIDASim: Simulating Realistic Microbiome Data using 'MIDASim'

The 'MIDASim' package is a microbiome data simulator for generating realistic microbiome datasets by adapting a user-provided template. It supports the controlled introduction of experimental signals-such as shifts in taxon relative abundances, prevalence, and sample library sizes-to create distinct synthetic populations under diverse simulation scenarios. For more details, see He et al. (2024) <doi:10.1186/s40168-024-01822-z>.

Version:	2.0
Depends:	R (≥ 3.5.0)
Imports:	psych, MASS, pracma, scam, stats
Suggests:	vegan, phyloseq, rmarkdown, knitr, roxygen2, testthat
Published:	2025-07-05
DOI:	10.32614/CRAN.package.MIDASim
Author:	Mengyu He [aut, cre]
Maintainer:	Mengyu He <mhe44 at emory.edu>
BugReports:	https://github.com/mengyu-he/MIDASim/issues
License:	GPL-2
URL:	https://github.com/mengyu-he/MIDASim
NeedsCompilation:	no
CRAN checks:	MIDASim results

Documentation:

Reference manual:	MIDASim.pdf
Vignettes:	MIDASim_vignette (source, R code)

Downloads:

Package source:	MIDASim_2.0.tar.gz
Windows binaries:	r-devel: not available, r-release: not available, r-oldrel: not available
macOS binaries:	r-release (arm64): not available, r-oldrel (arm64): not available, r-release (x86_64): MIDASim_2.0.tgz, r-oldrel (x86_64): MIDASim_2.0.tgz

Linking:

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