Last updated on 2026-08-01 06:54:02 CEST.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 6.0.1 | 275.50 | 235.28 | 510.78 | NOTE | |
| r-devel-linux-x86_64-debian-gcc | 6.0.1 | 204.69 | 160.93 | 365.62 | NOTE | |
| r-devel-linux-x86_64-fedora-clang | 6.0.1 | 349.00 | 343.84 | 692.84 | NOTE | |
| r-devel-linux-x86_64-fedora-gcc | 6.0.1 | 257.00 | 149.13 | 406.13 | NOTE | |
| r-devel-windows-x86_64 | 6.0.1 | 325.00 | 230.00 | 555.00 | ERROR | |
| r-patched-linux-x86_64 | 6.0.1 | 280.37 | 218.24 | 498.61 | OK | |
| r-release-linux-x86_64 | 6.0.1 | 281.84 | 232.22 | 514.06 | OK | |
| r-release-macos-arm64 | 6.0.1 | 64.00 | 13.00 | 77.00 | OK | |
| r-release-macos-x86_64 | 6.0.1 | 196.00 | 114.00 | 310.00 | OK | |
| r-release-windows-x86_64 | 6.0.1 | 333.00 | 245.00 | 578.00 | ERROR | |
| r-oldrel-macos-arm64 | 6.0.1 | 56.00 | 24.00 | 80.00 | OK | |
| r-oldrel-macos-x86_64 | 6.0.1 | 195.00 | 249.00 | 444.00 | OK | |
| r-oldrel-windows-x86_64 | 6.0.1 | 428.00 | 318.00 | 746.00 | ERROR |
Version: 6.0.1
Check: R code for possible problems
Result: NOTE
Found calls to structure() using deprecated special names:
nlmixr2est/R/print.R (.Names: 1)
nlmixr2est/tests/testthat/test-saem-translate.R (.Dim: 5, .Names: 2)
'.Names' should be changed to 'names'.
'.Dim' should be changed to 'dim'.
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-windows-x86_64
Version: 6.0.1
Check: for new files in some other directories
Result: NOTE
Found the following files/directories:
‘~/tmp/scratch/Rtmp01I6EX’ ‘~/tmp/scratch/Rtmp02ASwe’
‘~/tmp/scratch/Rtmp06xLU1’ ‘~/tmp/scratch/Rtmp0xtIOD’
‘~/tmp/scratch/Rtmp1KVyG2’ ‘~/tmp/scratch/Rtmp1hE5pe’
‘~/tmp/scratch/Rtmp1teF96’ ‘~/tmp/scratch/Rtmp2XRLvM’
‘~/tmp/scratch/Rtmp2dbIn7’ ‘~/tmp/scratch/Rtmp3AlhPm’
‘~/tmp/scratch/Rtmp3ViHHJ’ ‘~/tmp/scratch/Rtmp3jHVsx’
‘~/tmp/scratch/Rtmp3oeCiF’ ‘~/tmp/scratch/Rtmp4BIT3o’
‘~/tmp/scratch/Rtmp4hPjKh’ ‘~/tmp/scratch/Rtmp4n1DDA’
‘~/tmp/scratch/Rtmp4nwDr9’ ‘~/tmp/scratch/Rtmp5habo7’
‘~/tmp/scratch/Rtmp6EUXay’ ‘~/tmp/scratch/Rtmp72mIMk’
‘~/tmp/scratch/Rtmp7U1qGe’ ‘~/tmp/scratch/Rtmp7X3bB1’
‘~/tmp/scratch/Rtmp7jeo5D’ ‘~/tmp/scratch/Rtmp7swp6E’
‘~/tmp/scratch/Rtmp80CWdM’ ‘~/tmp/scratch/Rtmp8SWxAU’
‘~/tmp/scratch/Rtmp8fJo0b’ ‘~/tmp/scratch/Rtmp97bdTU’
‘~/tmp/scratch/Rtmp9cKAUh’ ‘~/tmp/scratch/Rtmp9fBUv1’
‘~/tmp/scratch/Rtmp9rsLmO’ ‘~/tmp/scratch/RtmpA2EbmS’
‘~/tmp/scratch/RtmpAICUXi’ ‘~/tmp/scratch/RtmpBGq1QY’
‘~/tmp/scratch/RtmpBWaxLo’ ‘~/tmp/scratch/RtmpBtglil’
‘~/tmp/scratch/RtmpC9NlSb’ ‘~/tmp/scratch/RtmpCSMvsR’
‘~/tmp/scratch/RtmpD5uXZH’ ‘~/tmp/scratch/RtmpD6I0oU’
‘~/tmp/scratch/RtmpDu4Q5s’ ‘~/tmp/scratch/RtmpEYzYvd’
‘~/tmp/scratch/RtmpEvDHXq’ ‘~/tmp/scratch/RtmpF7oWsi’
‘~/tmp/scratch/RtmpFLeIRP’ ‘~/tmp/scratch/RtmpFrLLxY’
‘~/tmp/scratch/RtmpGVidox’ ‘~/tmp/scratch/RtmpGW6wyl’
‘~/tmp/scratch/RtmpGwTNht’ ‘~/tmp/scratch/RtmpGwtfSn’
‘~/tmp/scratch/RtmpHFQuOf’ ‘~/tmp/scratch/RtmpHhewCJ’
‘~/tmp/scratch/RtmpHyhy6s’ ‘~/tmp/scratch/RtmpI9GUpq’
‘~/tmp/scratch/RtmpIrOpjY’ ‘~/tmp/scratch/RtmpIrWcyc’
‘~/tmp/scratch/RtmpJLBxPC’ ‘~/tmp/scratch/RtmpK2VpDI’
‘~/tmp/scratch/RtmpK3CIuk’ ‘~/tmp/scratch/RtmpKIMwhp’
‘~/tmp/scratch/RtmpKMbhzC’ ‘~/tmp/scratch/RtmpKn9dDd’
‘~/tmp/scratch/RtmpLHvd36’ ‘~/tmp/scratch/RtmpMMm7C2’
‘~/tmp/scratch/RtmpNCBDkQ’ ‘~/tmp/scratch/RtmpNIl9G2’
‘~/tmp/scratch/RtmpNef0jO’ ‘~/tmp/scratch/RtmpNfiU94’
‘~/tmp/scratch/RtmpOPprgM’ ‘~/tmp/scratch/RtmpOV92iO’
‘~/tmp/scratch/RtmpP1Ath4’ ‘~/tmp/scratch/RtmpPI6uJM’
‘~/tmp/scratch/RtmpPhhuoy’ ‘~/tmp/scratch/RtmpQAp3u8’
‘~/tmp/scratch/RtmpQJfmYt’ ‘~/tmp/scratch/RtmpQtozb6’
‘~/tmp/scratch/RtmpRTXvfC’ ‘~/tmp/scratch/RtmpRXeJCr’
‘~/tmp/scratch/RtmpRoYMaG’ ‘~/tmp/scratch/RtmpRtkqdS’
‘~/tmp/scratch/RtmpSUpHwG’ ‘~/tmp/scratch/RtmpStbcBi’
‘~/tmp/scratch/RtmpUGfFM6’ ‘~/tmp/scratch/RtmpUkbm0a’
‘~/tmp/scratch/RtmpUwgXJI’ ‘~/tmp/scratch/RtmpVQw6pp’
‘~/tmp/scratch/RtmpVVM26k’ ‘~/tmp/scratch/RtmpVvDwes’
‘~/tmp/scratch/RtmpW7q5wO’ ‘~/tmp/scratch/RtmpWkNRpr’
‘~/tmp/scratch/RtmpWnfM0z’ ‘~/tmp/scratch/RtmpWsSU4j’
‘~/tmp/scratch/RtmpYJYlO1’ ‘~/tmp/scratch/RtmpYW3tJJ’
‘~/tmp/scratch/RtmpYY0zGE’ ‘~/tmp/scratch/RtmpYceg8D’
‘~/tmp/scratch/RtmpYmK1hb’ ‘~/tmp/scratch/RtmpYuQfKo’
‘~/tmp/scratch/RtmpZqLJFx’ ‘~/tmp/scratch/RtmpZrhAZO’
‘~/tmp/scratch/Rtmpb2oJJE’ ‘~/tmp/scratch/Rtmpb3YfIb’
‘~/tmp/scratch/RtmpcVzNSK’ ‘~/tmp/scratch/RtmpdSwRmb’
‘~/tmp/scratch/RtmpdV6dn7’ ‘~/tmp/scratch/RtmpeBELYS’
‘~/tmp/scratch/Rtmpee27RV’ ‘~/tmp/scratch/RtmpehAUpo’
‘~/tmp/scratch/Rtmpf8Fruv’ ‘~/tmp/scratch/RtmpfOcCJ5’
‘~/tmp/scratch/Rtmpg60M7w’ ‘~/tmp/scratch/RtmpgNmnLs’
‘~/tmp/scratch/Rtmph0G8w2’ ‘~/tmp/scratch/RtmphPJLIk’
‘~/tmp/scratch/RtmphaX4MI’ ‘~/tmp/scratch/RtmphmCCfy’
‘~/tmp/scratch/RtmpjHBHXp’ ‘~/tmp/scratch/RtmpjUNBKJ’
‘~/tmp/scratch/Rtmpk3xqEa’ ‘~/tmp/scratch/Rtmpkcml8z’
‘~/tmp/scratch/Rtmplc1DI8’ ‘~/tmp/scratch/Rtmplhvteu’
‘~/tmp/scratch/Rtmpme7Tj3’ ‘~/tmp/scratch/RtmpnBL3Vo’
‘~/tmp/scratch/RtmpnmR46C’ ‘~/tmp/scratch/RtmpoLdwaY’
‘~/tmp/scratch/Rtmpp7mgGN’ ‘~/tmp/scratch/RtmppYcYH5’
‘~/tmp/scratch/Rtmppx7Knd’ ‘~/tmp/scratch/RtmpqHQU7f’
‘~/tmp/scratch/RtmpqjmBkA’ ‘~/tmp/scratch/RtmprDPzcu’
‘~/tmp/scratch/RtmprTHggh’ ‘~/tmp/scratch/Rtmps72cKe’
‘~/tmp/scratch/RtmpslZJ6p’ ‘~/tmp/scratch/Rtmpsx2RdY’
‘~/tmp/scratch/RtmptPCKa5’ ‘~/tmp/scratch/Rtmpu0AiNj’
‘~/tmp/scratch/RtmpuI9nmJ’ ‘~/tmp/scratch/RtmpuxhpoP’
‘~/tmp/scratch/RtmpvufGHr’ ‘~/tmp/scratch/Rtmpw9P4op’
‘~/tmp/scratch/RtmpwjhR5T’ ‘~/tmp/scratch/Rtmpx3WR1h’
‘~/tmp/scratch/RtmpxeFPQC’ ‘~/tmp/scratch/RtmpxjLyVL’
‘~/tmp/scratch/RtmpxqnnV9’ ‘~/tmp/scratch/RtmpyRcXL6’
‘~/tmp/scratch/RtmpyjEPWU’ ‘~/tmp/scratch/RtmpzvzCFb’
‘~/tmp/scratch/xvfb-run.0oa8kw’ ‘~/tmp/scratch/xvfb-run.1eRoEH’
‘~/tmp/scratch/xvfb-run.28Ubwe’ ‘~/tmp/scratch/xvfb-run.2yLFm3’
‘~/tmp/scratch/xvfb-run.5BvY1q’ ‘~/tmp/scratch/xvfb-run.5oR05o’
‘~/tmp/scratch/xvfb-run.5yPXRU’ ‘~/tmp/scratch/xvfb-run.5zJwYH’
‘~/tmp/scratch/xvfb-run.79RHNU’ ‘~/tmp/scratch/xvfb-run.7gi2nD’
‘~/tmp/scratch/xvfb-run.8Urj5O’ ‘~/tmp/scratch/xvfb-run.8lVaRH’
‘~/tmp/scratch/xvfb-run.9HyStF’ ‘~/tmp/scratch/xvfb-run.9oqDDA’
‘~/tmp/scratch/xvfb-run.AoJbhj’ ‘~/tmp/scratch/xvfb-run.BjC39G’
‘~/tmp/scratch/xvfb-run.CZMZb2’ ‘~/tmp/scratch/xvfb-run.DY9blw’
‘~/tmp/scratch/xvfb-run.E4tJsz’ ‘~/tmp/scratch/xvfb-run.E5VeOX’
‘~/tmp/scratch/xvfb-run.GOf9eX’ ‘~/tmp/scratch/xvfb-run.GS75c2’
‘~/tmp/scratch/xvfb-run.HuJfPh’ ‘~/tmp/scratch/xvfb-run.IJI1qJ’
‘~/tmp/scratch/xvfb-run.IRdkXS’ ‘~/tmp/scratch/xvfb-run.IfaT9q’
‘~/tmp/scratch/xvfb-run.Krm5MW’ ‘~/tmp/scratch/xvfb-run.NTifAd’
‘~/tmp/scratch/xvfb-run.NrWKY5’ ‘~/tmp/scratch/xvfb-run.NxI9Sl’
‘~/tmp/scratch/xvfb-run.R15p5H’ ‘~/tmp/scratch/xvfb-run.Smnicx’
‘~/tmp/scratch/xvfb-run.TiUjhu’ ‘~/tmp/scratch/xvfb-run.Ts9Pr0’
‘~/tmp/scratch/xvfb-run.V3c5Gc’ ‘~/tmp/scratch/xvfb-run.VXT7PT’
‘~/tmp/scratch/xvfb-run.WQMyUN’ ‘~/tmp/scratch/xvfb-run.XSq1aj’
‘~/tmp/scratch/xvfb-run.ZYL351’ ‘~/tmp/scratch/xvfb-run.ZwjX8c’
‘~/tmp/scratch/xvfb-run.aXa1PV’ ‘~/tmp/scratch/xvfb-run.aoNdPP’
‘~/tmp/scratch/xvfb-run.blGsRT’ ‘~/tmp/scratch/xvfb-run.cQAfbW’
‘~/tmp/scratch/xvfb-run.cX8E2Z’ ‘~/tmp/scratch/xvfb-run.gOacpU’
‘~/tmp/scratch/xvfb-run.huTVCN’ ‘~/tmp/scratch/xvfb-run.jCQvpz’
‘~/tmp/scratch/xvfb-run.nQEULv’ ‘~/tmp/scratch/xvfb-run.nxWShd’
‘~/tmp/scratch/xvfb-run.o2fanp’ ‘~/tmp/scratch/xvfb-run.oi7mZg’
‘~/tmp/scratch/xvfb-run.pFR87B’ ‘~/tmp/scratch/xvfb-run.qdtX38’
‘~/tmp/scratch/xvfb-run.sTPsp7’ ‘~/tmp/scratch/xvfb-run.sYTg2E’
‘~/tmp/scratch/xvfb-run.uFu9v2’ ‘~/tmp/scratch/xvfb-run.uQVnfZ’
‘~/tmp/scratch/xvfb-run.xirfho’ ‘~/tmp/scratch/xvfb-run.y3p6Lt’
‘~/tmp/scratch/xvfb-run.z58eHI’ ‘~/tmp/scratch/xvfb-run.zDOd8l’
‘~/tmp/scratch/xvfb-run.zveUaE’
‘~/.cache/pocl/uncached/tempfile_h7inXj’
Flavor: r-devel-linux-x86_64-debian-gcc
Version: 6.0.1
Check: tests
Result: ERROR
Running 'testthat.R' [32s]
Running the tests in 'tests/testthat.R' failed.
Complete output:
> library(testthat)
> library(data.table)
Attaching package: 'data.table'
The following object is masked from 'package:base':
%notin%
> library(rxode2)
rxode2 5.1.5 using 2 threads (see ?getRxThreads)
no cache: create with `rxCreateCache()`
> library(nlmixr2est)
Loading required package: nlmixr2data
Attaching package: 'nlmixr2est'
The following objects are masked from 'package:rxode2':
boxCox, yeoJohnson
> library(testthat)
> if (!identical(Sys.getenv("NOT_CRAN"), "true")) {
+ # when testing CRAN, only use two thread
+ setRxThreads(2L)
+ setDTthreads(2L)
+ Sys.setenv(OMP_NUM_THREADS = "2")
+ Sys.setenv(MKL_NUM_THREADS = "2")
+ if (identical(Sys.info()["sysname"], "Darwin")) {
+ rxode2::rxUnloadAll(set=FALSE)
+ }
+ }
>
> test_check("nlmixr2est")
✓ Loading cached fit: one.compartment.fit.saem
✓ Loading cached fit: one.compartment.fit.saem.cwres
✓ Loading cached fit: one.compartment.fit.focei
✓ Loading cached fit: one.compartment.fit.focei.fast
✓ Loading cached fit: one.compartment.fit.foce
✓ Loading cached fit: one.compartment.fit.foi
✓ Loading cached fit: one.compartment.fit.fo
✓ Loading cached fit: one.compartment.fit.posthoc
✓ Loading cached fit: one.compartment.with.lag.fit.focei
✓ Loading cached fit: one.compartment.with.lag.fit.saem
✓ Helper-fits.R loaded successfully
Cache version: v1.0.2-nlmixr2est-6.0.1
Cache directory: ./fixtures
Flavors: r-devel-windows-x86_64, r-release-windows-x86_64
Version: 6.0.1
Check: tests
Result: ERROR
Running 'testthat.R' [41s]
Running the tests in 'tests/testthat.R' failed.
Complete output:
> library(testthat)
> library(data.table)
> library(rxode2)
rxode2 5.1.5 using 2 threads (see ?getRxThreads)
no cache: create with `rxCreateCache()`
> library(nlmixr2est)
Loading required package: nlmixr2data
Attaching package: 'nlmixr2est'
The following objects are masked from 'package:rxode2':
boxCox, yeoJohnson
> library(testthat)
> if (!identical(Sys.getenv("NOT_CRAN"), "true")) {
+ # when testing CRAN, only use two thread
+ setRxThreads(2L)
+ setDTthreads(2L)
+ Sys.setenv(OMP_NUM_THREADS = "2")
+ Sys.setenv(MKL_NUM_THREADS = "2")
+ if (identical(Sys.info()["sysname"], "Darwin")) {
+ rxode2::rxUnloadAll(set=FALSE)
+ }
+ }
>
> test_check("nlmixr2est")
✓ Loading cached fit: one.compartment.fit.saem
✓ Loading cached fit: one.compartment.fit.saem.cwres
✓ Loading cached fit: one.compartment.fit.focei
✓ Loading cached fit: one.compartment.fit.focei.fast
✓ Loading cached fit: one.compartment.fit.foce
✓ Loading cached fit: one.compartment.fit.foi
✓ Loading cached fit: one.compartment.fit.fo
✓ Loading cached fit: one.compartment.fit.posthoc
✓ Loading cached fit: one.compartment.with.lag.fit.focei
✓ Loading cached fit: one.compartment.with.lag.fit.saem
✓ Helper-fits.R loaded successfully
Cache version: v1.0.2-nlmixr2est-6.0.1
Cache directory: ./fixtures
Flavor: r-oldrel-windows-x86_64