Last updated on 2026-01-08 11:48:48 CET.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 0.1.0 | 113.09 | 1130.91 | 1244.00 | NOTE | |
| r-devel-linux-x86_64-debian-gcc | 0.1.0 | 104.24 | 780.97 | 885.21 | NOTE | |
| r-devel-linux-x86_64-fedora-clang | 0.1.0 | 220.00 | 1919.07 | 2139.07 | ERROR | |
| r-devel-linux-x86_64-fedora-gcc | 0.1.0 | 286.00 | 1804.65 | 2090.65 | OK | |
| r-devel-windows-x86_64 | 0.1.0 | 130.00 | 909.00 | 1039.00 | NOTE | |
| r-patched-linux-x86_64 | 0.1.0 | 142.39 | 1073.92 | 1216.31 | OK | |
| r-release-linux-x86_64 | 0.1.0 | 136.09 | 1090.57 | 1226.66 | OK | |
| r-release-macos-arm64 | 0.1.0 | OK | ||||
| r-release-macos-x86_64 | 0.1.0 | 81.00 | 1033.00 | 1114.00 | OK | |
| r-release-windows-x86_64 | 0.1.0 | 130.00 | 912.00 | 1042.00 | OK | |
| r-oldrel-macos-arm64 | 0.1.0 | NOTE | ||||
| r-oldrel-macos-x86_64 | 0.1.0 | 78.00 | 1122.00 | 1200.00 | NOTE | |
| r-oldrel-windows-x86_64 | 0.1.0 | 123.00 | 1283.00 | 1406.00 | OK |
Version: 0.1.0
Check: compiled code
Result: NOTE
File ‘cgmguru/libs/cgmguru.so’:
Found non-API call to R: ‘ATTRIB’
Compiled code should not call non-API entry points in R.
See ‘Writing portable packages’ in the ‘Writing R Extensions’ manual,
and section ‘Moving into C API compliance’ for issues with the use of
non-API entry points.
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc
Version: 0.1.0
Check: re-building of vignette outputs
Result: ERROR
Error(s) in re-building vignettes:
--- re-building ‘detect_all_events.Rmd’ using rmarkdown
*** caught segfault ***
address 0x786, cause 'memory not mapped'
Traceback:
1: dev.off(dv)
2: eng_r(options)
3: block_exec(params)
4: call_block(x)
5: process_group(group)
6: withCallingHandlers(if (tangle) process_tangle(group) else process_group(group), error = function(e) { if (progress && is.function(pb$interrupt)) pb$interrupt() if (is_R_CMD_build() || is_R_CMD_check()) error <<- format(e) })
7: with_options(withCallingHandlers(if (tangle) process_tangle(group) else process_group(group), error = function(e) { if (progress && is.function(pb$interrupt)) pb$interrupt() if (is_R_CMD_build() || is_R_CMD_check()) error <<- format(e) }), list(rlang_trace_top_env = knit_global()))
8: xfun:::handle_error(with_options(withCallingHandlers(if (tangle) process_tangle(group) else process_group(group), error = function(e) { if (progress && is.function(pb$interrupt)) pb$interrupt() if (is_R_CMD_build() || is_R_CMD_check()) error <<- format(e) }), list(rlang_trace_top_env = knit_global())), function(loc) { setwd(wd) write_utf8(res, output %n% stdout()) paste0("\nQuitting from ", loc, if (!is.null(error)) paste0("\n", rule(), error, "\n", rule()))}, if (labels[i] != "") sprintf(" [%s]", labels[i]), get_loc)
9: process_file(text, output)
10: knitr::knit(knit_input, knit_output, envir = envir, quiet = quiet)
11: rmarkdown::render(file, encoding = encoding, quiet = quiet, envir = globalenv(), output_dir = getwd(), ...)
12: vweave_rmarkdown(...)
13: engine$weave(file, quiet = quiet, encoding = enc)
14: doTryCatch(return(expr), name, parentenv, handler)
15: tryCatchOne(expr, names, parentenv, handlers[[1L]])
16: tryCatchList(expr, classes, parentenv, handlers)
17: tryCatch({ engine$weave(file, quiet = quiet, encoding = enc) setwd(startdir) output <- find_vignette_product(name, by = "weave", engine = engine) if (!have.makefile && vignette_is_tex(output)) { texi2pdf(file = output, clean = FALSE, quiet = quiet) output <- find_vignette_product(name, by = "texi2pdf", engine = engine) }}, error = function(e) { OK <<- FALSE message(gettextf("Error: processing vignette '%s' failed with diagnostics:\n%s", file, conditionMessage(e)))})
18: tools:::.buildOneVignette("detect_all_events.Rmd", "/data/gannet/ripley/R/packages/tests-clang/cgmguru.Rcheck/vign_test/cgmguru", TRUE, FALSE, "detect_all_events", "UTF-8", "/tmp/RtmpQkEYfs/working_dir/Rtmp2m8Hsv/file273e223aa87b4e.rds")
An irrecoverable exception occurred. R is aborting now ...
--- re-building ‘detect_between_maxima.Rmd’ using rmarkdown
[WARNING] Deprecated: --highlight-style. Use --syntax-highlighting instead.
--- finished re-building ‘detect_between_maxima.Rmd’
--- re-building ‘detect_hyperglycemic_events.Rmd’ using rmarkdown
[WARNING] Deprecated: --highlight-style. Use --syntax-highlighting instead.
--- finished re-building ‘detect_hyperglycemic_events.Rmd’
--- re-building ‘detect_hypoglycemic_events.Rmd’ using rmarkdown
[WARNING] Deprecated: --highlight-style. Use --syntax-highlighting instead.
--- finished re-building ‘detect_hypoglycemic_events.Rmd’
--- re-building ‘examples.Rmd’ using rmarkdown
[WARNING] Deprecated: --highlight-style. Use --syntax-highlighting instead.
--- finished re-building ‘examples.Rmd’
--- re-building ‘excursion.Rmd’ using rmarkdown
[WARNING] Deprecated: --highlight-style. Use --syntax-highlighting instead.
--- finished re-building ‘excursion.Rmd’
--- re-building ‘find_local_maxima.Rmd’ using rmarkdown
[WARNING] Deprecated: --highlight-style. Use --syntax-highlighting instead.
--- finished re-building ‘find_local_maxima.Rmd’
--- re-building ‘find_max_after_hours.Rmd’ using rmarkdown
[WARNING] Deprecated: --highlight-style. Use --syntax-highlighting instead.
--- finished re-building ‘find_max_after_hours.Rmd’
--- re-building ‘find_max_before_hours.Rmd’ using rmarkdown
[WARNING] Deprecated: --highlight-style. Use --syntax-highlighting instead.
--- finished re-building ‘find_max_before_hours.Rmd’
--- re-building ‘find_min_after_hours.Rmd’ using rmarkdown
[WARNING] Deprecated: --highlight-style. Use --syntax-highlighting instead.
--- finished re-building ‘find_min_after_hours.Rmd’
--- re-building ‘find_min_before_hours.Rmd’ using rmarkdown
[WARNING] Deprecated: --highlight-style. Use --syntax-highlighting instead.
--- finished re-building ‘find_min_before_hours.Rmd’
--- re-building ‘find_new_maxima.Rmd’ using rmarkdown
[WARNING] Deprecated: --highlight-style. Use --syntax-highlighting instead.
--- finished re-building ‘find_new_maxima.Rmd’
--- re-building ‘grid.Rmd’ using rmarkdown
[WARNING] Deprecated: --highlight-style. Use --syntax-highlighting instead.
--- finished re-building ‘grid.Rmd’
--- re-building ‘intro.Rmd’ using rmarkdown
[WARNING] Deprecated: --highlight-style. Use --syntax-highlighting instead.
--- finished re-building ‘intro.Rmd’
--- re-building ‘maxima_grid.Rmd’ using rmarkdown
[WARNING] Deprecated: --highlight-style. Use --syntax-highlighting instead.
--- finished re-building ‘maxima_grid.Rmd’
--- re-building ‘mod_grid.Rmd’ using rmarkdown
[WARNING] Deprecated: --highlight-style. Use --syntax-highlighting instead.
--- finished re-building ‘mod_grid.Rmd’
--- re-building ‘orderfast.Rmd’ using rmarkdown
[WARNING] Deprecated: --highlight-style. Use --syntax-highlighting instead.
--- finished re-building ‘orderfast.Rmd’
--- re-building ‘start_finder.Rmd’ using rmarkdown
[WARNING] Deprecated: --highlight-style. Use --syntax-highlighting instead.
--- finished re-building ‘start_finder.Rmd’
--- re-building ‘transform_df.Rmd’ using rmarkdown
[WARNING] Deprecated: --highlight-style. Use --syntax-highlighting instead.
--- finished re-building ‘transform_df.Rmd’
SUMMARY: processing the following file failed:
‘detect_all_events.Rmd’
Error: Vignette re-building failed.
Execution halted
Flavor: r-devel-linux-x86_64-fedora-clang
Version: 0.1.0
Check: compiled code
Result: NOTE
File 'cgmguru/libs/x64/cgmguru.dll':
Found non-API call to R: 'ATTRIB'
Compiled code should not call non-API entry points in R.
See 'Writing portable packages' in the 'Writing R Extensions' manual,
and section 'Moving into C API compliance' for issues with the use of
non-API entry points.
Flavor: r-devel-windows-x86_64
Version: 0.1.0
Check: installed package size
Result: NOTE
installed size is 12.1Mb
sub-directories of 1Mb or more:
doc 1.0Mb
libs 10.9Mb
Flavors: r-oldrel-macos-arm64, r-oldrel-macos-x86_64