CRAN Package Check Results for Maintainer Carl Boettiger <cboettig at gmail.com>

CRAN Package Check Results for Maintainer ‘Carl Boettiger <cboettig at gmail.com>’

Last updated on 2025-12-28 11:49:21 CET.

Package	ERROR	NOTE	OK
arkdb		1	12
codemeta			13
codemetar			13
contentid			13
duckdbfs			13
earthdatalogin			13
EcoNetGen		2	11
EML			13
emld			13
gbifdb		2	11
knitcitations			13
minioclient			13
neonstore		10	3
piggyback			13
pmc			13
rdflib			13
rfigshare	2	11
rfishbase			13
RNeXML		13
sarsop		3	10
taxadb		10	3
taxalight		2	11
treebase			13
virtuoso			13

Package arkdb

Current CRAN status: NOTE: 1, OK: 12

Version: 0.0.18
Check: package dependencies
Result: NOTE Package suggested but not available for checking: ‘arrow’ Flavor: r-oldrel-macos-x86_64

Version: 0.0.18
Check: Rd cross-references
Result: NOTE Package unavailable to check Rd xrefs: ‘arrow’ Flavor: r-oldrel-macos-x86_64

Version: 0.2.4
Check: CRAN incoming feasibility
Result: NOTE Maintainer: ‘Carl Boettiger <cboettig@gmail.com>’ The Description field contains <arXiv:1708.01242>. Please refer to arXiv e-prints via their arXiv DOI <doi:10.48550/arXiv.YYMM.NNNNN>. Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc

Package EML

Current CRAN status: OK: 13

Package emld

Current CRAN status: OK: 13

Additional issues

M1mac

Package gbifdb

Current CRAN status: NOTE: 2, OK: 11

Version: 1.0.0
Check: CRAN incoming feasibility
Result: NOTE Maintainer: ‘Carl Boettiger <cboettig@gmail.com>’ The BugReports field in DESCRIPTION has https://github.com/ropensci/gbifdb which should likely be https://github.com/ropensci/gbifdb/issues instead. Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc

Package knitcitations

Current CRAN status: OK: 13

Package minioclient

Current CRAN status: OK: 13

Package neonstore

Current CRAN status: NOTE: 10, OK: 3

Version: 0.5.1
Check: DESCRIPTION meta-information
Result: NOTE Missing dependency on R >= 4.1.0 because package code uses the pipe |> or function shorthand \(...) syntax added in R 4.1.0. File(s) using such syntax: ‘neon_cloud.R’ Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-windows-x86_64, r-patched-linux-x86_64, r-release-linux-x86_64, r-release-macos-arm64, r-release-macos-x86_64, r-release-windows-x86_64

Package piggyback

Current CRAN status: OK: 13

Package pmc

Current CRAN status: OK: 13

Package rdflib

Current CRAN status: OK: 13

Package rfigshare

Current CRAN status: ERROR: 2, NOTE: 11

Version: 0.3.8
Check: Rd files
Result: NOTE checkRd: (-1) fs_search.Rd:76: Lost braces 76 | \\code{\link{fs_auth}} \code{\link{fs_browse}} | ^ Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-windows-x86_64, r-patched-linux-x86_64, r-release-linux-x86_64, r-release-macos-arm64, r-release-macos-x86_64, r-release-windows-x86_64, r-oldrel-macos-arm64, r-oldrel-macos-x86_64, r-oldrel-windows-x86_64

Version: 0.3.8
Check: tests
Result: ERROR Running ‘test-all.R’ [2s/3s] Running the tests in ‘tests/test-all.R’ failed. Complete output: > if (packageVersion("testthat") >= "0.7.1.99") { + library(testthat) + test_check("rfigshare") + } else { + library(testthat) + test_package("rfigshare") + } Loading required package: rfigshare Saving _problems/test_figshare-8.R [ FAIL 1 | WARN 0 | SKIP 0 | PASS 0 ] ══ Failed tests ════════════════════════════════════════════════════════════════ ── Error ('test_figshare.R:8:1'): (code run outside of `test_that()`) ────────── Error: Please install xml2 package Backtrace: ▆ 1. └─rfigshare::fs_auth(...) at test_figshare.R:8:1 2. ├─base::warning(...) 3. ├─base::paste(...) 4. └─httr::content(response) 5. └─httr:::parse_auto(raw, type, encoding, ...) 6. └─httr (local) parser(x = content, type = type, encoding = encoding, ...) 7. └─httr:::need_package("xml2") [ FAIL 1 | WARN 0 | SKIP 0 | PASS 0 ] Error: ! Test failures. Execution halted Flavors: r-devel-linux-x86_64-debian-gcc, r-release-linux-x86_64

Package rfishbase

Current CRAN status: OK: 13

Package RNeXML

Current CRAN status: NOTE: 13

Version: 2.4.11
Check: Rd files
Result: NOTE checkRd: (-1) nexml_get.Rd:30: Lost braces in \itemize; meant \describe ? checkRd: (-1) nexml_get.Rd:31: Lost braces in \itemize; meant \describe ? checkRd: (-1) nexml_get.Rd:32: Lost braces in \itemize; meant \describe ? checkRd: (-1) nexml_get.Rd:33: Lost braces in \itemize; meant \describe ? checkRd: (-1) nexml_get.Rd:34: Lost braces in \itemize; meant \describe ? checkRd: (-1) nexml_get.Rd:35: Lost braces in \itemize; meant \describe ? Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-windows-x86_64, r-patched-linux-x86_64, r-release-linux-x86_64, r-release-macos-arm64, r-release-macos-x86_64, r-release-windows-x86_64, r-oldrel-macos-arm64, r-oldrel-macos-x86_64, r-oldrel-windows-x86_64

Package sarsop

Current CRAN status: NOTE: 3, OK: 10

Additional issues

musl

Version: 0.6.16
Check: installed package size
Result: NOTE installed size is 5.3Mb sub-directories of 1Mb or more: bin 4.5Mb Flavors: r-oldrel-macos-arm64, r-oldrel-macos-x86_64, r-oldrel-windows-x86_64

Package taxadb

Current CRAN status: NOTE: 10, OK: 3

Version: 0.2.1
Check: DESCRIPTION meta-information
Result: NOTE Missing dependency on R >= 4.1.0 because package code uses the pipe |> or function shorthand \(...) syntax added in R 4.1.0. File(s) using such syntax: ‘parse_schema.R’ Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-windows-x86_64, r-patched-linux-x86_64, r-release-linux-x86_64, r-release-macos-arm64, r-release-macos-x86_64, r-release-windows-x86_64

Package taxalight

Current CRAN status: NOTE: 2, OK: 11

Version: 0.1.5
Check: CRAN incoming feasibility
Result: NOTE Maintainer: ‘Carl Boettiger <cboettig@gmail.com>’ The BugReports field in DESCRIPTION has https://github.com/cboettig/taxalight which should likely be https://github.com/cboettig/taxalight/issues instead. Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc

Package treebase

Current CRAN status: OK: 13

Package virtuoso

Current CRAN status: OK: 13