CRAN Package Check Results for Maintainer ‘Aviezer Lifshitz <aviezer.lifshitz at weizmann.ac.il>’

Last updated on 2026-03-30 06:50:59 CEST.

Package	ERROR	NOTE	OK
babynamesIL			14
jlview	2		11
labNorm		14
misha		3	8
naryn		2	9
tglkmeans			11
tgstat			11

Package babynamesIL

Current CRAN status: OK: 14

Package jlview

Current CRAN status: ERROR: 2, OK: 11

Version: 0.1.0
Check: tests
Result: ERROR Running 'testthat.R' [666m] Running the tests in 'tests/testthat.R' failed. Complete output: > library(testthat) > library(jlview) > > test_check("jlview") Julia version 1.11.3 at location C:\PROGRA~1\Julia\bin will be used. Loading setup script for JuliaCall... Flavor: r-release-windows-x86_64

Version: 0.1.0
Check: tests
Result: ERROR Running 'testthat.R' [53s] Running the tests in 'tests/testthat.R' failed. Complete output: > library(testthat) > library(jlview) > > test_check("jlview") Julia version 1.11.3 at location C:\PROGRA~1\Julia\bin will be used. Loading setup script for JuliaCall... Finish loading setup script for JuliaCall. 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Saving _problems/test-named-44.R Saving _problems/test-no-materialize-147.R 5000×1000 Matrix{Float64}: 0.750298 0.688964 0.126435 … 0.425225 0.0544214 -0.940507 0.447235 -0.969492 0.0294009 -0.648195 1.08474 -1.291 -0.185406 -1.40518 -2.18054 -0.589206 0.964384 1.1531 0.794394 -1.01371 -0.164834 -0.186878 1.44599 1.28224 0.573255 -1.27094 0.130278 0.87368 -0.0949544 1.00097 -0.394319 0.423086 0.622697 … 0.487734 0.142738 0.796481 -1.923 -0.0970792 1.18006 0.963558 -1.54249 -1.2892 -0.685675 0.94013 -0.88369 -0.530954 0.668422 -1.62358 -2.07403 -1.05581 0.842461 -0.70538 -0.208836 -0.562293 0.425215 1.28594 -0.897765 1.11167 0.160584 2.20171 ⋮ ⋱ 0.299971 1.89926 0.357057 -0.951698 -1.10846 1.03189 1.0752 0.79055 -1.89781 -0.259343 0.78076 0.443016 0.376456 -0.949067 0.298124 0.768554 -0.146539 -0.731869 0.744641 -0.0377044 -0.253379 -0.0452424 -0.879474 0.400291 -1.50289 1.24632 -1.29335 … -0.604694 0.610223 0.831506 0.207577 0.309873 0.495187 -0.19553 0.0576859 1.85037 0.297106 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96.0 97.0 98.0 99.0 100.0 3-element Vector{Float64}: 1.0 NaN 3.0 4-element Vector{Float64}: 5.0 NaN 2.0 8.0 100-element Vector{Float64}: 1.0 2.0 3.0 4.0 5.0 6.0 7.0 8.0 9.0 10.0 ⋮ 92.0 93.0 94.0 95.0 96.0 97.0 98.0 99.0 100.0 500-element Vector{Float64}: 0.1149082357299338 0.5506160451722003 0.11453890533090227 0.3055681906109169 0.7312697106165521 0.05243496329136177 0.7157613254571714 0.2663855222129987 0.00792510884712394 0.29439013068561737 ⋮ 0.1732223021650905 0.628356025397972 0.12509469344680935 0.7782510658552426 0.6512741176619551 0.6726159829358062 0.33759436072314575 0.6209422102321356 0.9609129110619989 100-element Vector{Float64}: 1.0 2.0 3.0 4.0 5.0 6.0 7.0 8.0 9.0 10.0 ⋮ 92.0 93.0 94.0 95.0 96.0 97.0 98.0 99.0 100.0 100-element Vector{Float64}: 1.0 2.0 3.0 4.0 5.0 6.0 7.0 8.0 9.0 10.0 ⋮ 92.0 93.0 94.0 95.0 96.0 97.0 98.0 99.0 100.0 100-element Vector{Float64}: 1.0 2.0 3.0 4.0 5.0 6.0 7.0 8.0 9.0 10.0 ⋮ 92.0 93.0 94.0 95.0 96.0 97.0 98.0 99.0 100.0 100-element Vector{Float64}: 1.0 2.0 3.0 4.0 5.0 6.0 7.0 8.0 9.0 10.0 ⋮ 92.0 93.0 94.0 95.0 96.0 97.0 98.0 99.0 100.0 1000-element Vector{Float64}: 0.6722995397992888 0.8410872004760505 0.37247078568012226 0.5088358909898856 0.8141927908359198 0.7334894372349097 0.36632038599249206 0.1815993978578464 0.8354832466628233 0.893285675008688 ⋮ 0.45290932348354673 0.7260700747953415 0.567749512264421 0.3713957534922543 0.3093553760497153 0.6601311529765215 0.19371377079982743 0.27180825611675363 0.6266998900909566 100-element Vector{Float64}: 0.5058673416735527 0.6350493458385104 0.06483418874034663 0.6453981954171849 0.5184931383131436 0.2341280498206305 0.4194343840610838 0.08561682841796636 0.1857957623547445 0.3390798425966818 ⋮ 0.856443280718742 0.6680007372796043 0.5801051138771574 0.2938455037929554 0.016965191096343313 0.30880655407196544 0.7153030474166784 0.6432108075891095 0.8334418399217967 10-element Vector{Float64}: 1.0 2.0 3.0 4.0 5.0 6.0 7.0 8.0 9.0 10.0 3-element Vector{Float64}: 1.0 2.0 3.0 10-element Vector{Float64}: 1.0 2.0 3.0 4.0 5.0 6.0 7.0 8.0 9.0 10.0 10-element Vector{Float64}: 1.0 2.0 3.0 4.0 5.0 6.0 7.0 8.0 9.0 10.0 10-element Vector{Float64}: 1.0 2.0 3.0 4.0 5.0 6.0 7.0 8.0 9.0 10.0 10-element Vector{Float64}: 1.0 2.0 3.0 4.0 5.0 6.0 7.0 8.0 9.0 10.0 10-element Vector{Float64}: 1.0 2.0 3.0 4.0 5.0 6.0 7.0 8.0 9.0 10.0 5-element Vector{Int32}: 1 2 3 4 5 3×3 Matrix{Float64}: 1.0 1.0 1.0 1.0 1.0 1.0 1.0 1.0 1.0 [ FAIL 5 | WARN 1 | SKIP 0 | PASS 302 ] ══ Failed tests ════════════════════════════════════════════════════════════════ ── Error ('test-named.R:4:5'): named vector has correct names ────────────────── Error: Error happens in Julia. ArgumentError: Package NamedArrays not found in current path. - Run `import Pkg; Pkg.add("NamedArrays")` to install the NamedArrays package. Stacktrace: [1] macro expansion @ .\loading.jl:2296 [inlined] [2] macro expansion @ .\lock.jl:273 [inlined] [3] __require(into::Module, mod::Symbol) @ Base .\loading.jl:2271 [4] #invoke_in_world#3 @ .\essentials.jl:1089 [inlined] [5] invoke_in_world @ .\essentials.jl:1086 [inlined] [6] require(into::Module, mod::Symbol) @ Base .\loading.jl:2260 [7] eval @ .\boot.jl:430 [inlined] [8] eval_string(x::String) @ Main.JuliaCall D:\RCompile\CRANpkg\lib\4.4\JuliaCall\julia\setup.jl:203 [9] docall(call1::Ptr{Nothing}) @ Main.JuliaCall D:\RCompile\CRANpkg\lib\4.4\JuliaCall\julia\setup.jl:176 Backtrace: ▆ 1. └─JuliaCall::julia_command("using NamedArrays") at test-named.R:4:5 2. └─julia$call(...) 3. └─julia$do.call(func_name, list(...), need_return, show_value) ── Error ('test-named.R:17:5'): named vector has correct values ──────────────── Error: Error happens in Julia. ArgumentError: Package NamedArrays not found in current path. - Run `import Pkg; Pkg.add("NamedArrays")` to install the NamedArrays package. Stacktrace: [1] macro expansion @ .\loading.jl:2296 [inlined] [2] macro expansion @ .\lock.jl:273 [inlined] [3] __require(into::Module, mod::Symbol) @ Base .\loading.jl:2271 [4] #invoke_in_world#3 @ .\essentials.jl:1089 [inlined] [5] invoke_in_world @ .\essentials.jl:1086 [inlined] [6] require(into::Module, mod::Symbol) @ Base .\loading.jl:2260 [7] eval @ .\boot.jl:430 [inlined] [8] eval_string(x::String) @ Main.JuliaCall D:\RCompile\CRANpkg\lib\4.4\JuliaCall\julia\setup.jl:203 [9] docall(call1::Ptr{Nothing}) @ Main.JuliaCall D:\RCompile\CRANpkg\lib\4.4\JuliaCall\julia\setup.jl:176 Backtrace: ▆ 1. └─JuliaCall::julia_command("using NamedArrays") at test-named.R:17:5 2. └─julia$call(...) 3. └─julia$do.call(func_name, list(...), need_return, show_value) ── Error ('test-named.R:30:5'): named matrix has correct rownames and colnames ── Error: Error happens in Julia. ArgumentError: Package NamedArrays not found in current path. - Run `import Pkg; Pkg.add("NamedArrays")` to install the NamedArrays package. Stacktrace: [1] macro expansion @ .\loading.jl:2296 [inlined] [2] macro expansion @ .\lock.jl:273 [inlined] [3] __require(into::Module, mod::Symbol) @ Base .\loading.jl:2271 [4] #invoke_in_world#3 @ .\essentials.jl:1089 [inlined] [5] invoke_in_world @ .\essentials.jl:1086 [inlined] [6] require(into::Module, mod::Symbol) @ Base .\loading.jl:2260 [7] eval @ .\boot.jl:430 [inlined] [8] eval_string(x::String) @ Main.JuliaCall D:\RCompile\CRANpkg\lib\4.4\JuliaCall\julia\setup.jl:203 [9] docall(call1::Ptr{Nothing}) @ Main.JuliaCall D:\RCompile\CRANpkg\lib\4.4\JuliaCall\julia\setup.jl:176 Backtrace: ▆ 1. └─JuliaCall::julia_command("using NamedArrays") at test-named.R:30:5 2. └─julia$call(...) 3. └─julia$do.call(func_name, list(...), need_return, show_value) ── Error ('test-named.R:44:5'): named matrix colSums works correctly ─────────── Error: Error happens in Julia. ArgumentError: Package NamedArrays not found in current path. - Run `import Pkg; Pkg.add("NamedArrays")` to install the NamedArrays package. Stacktrace: [1] macro expansion @ .\loading.jl:2296 [inlined] [2] macro expansion @ .\lock.jl:273 [inlined] [3] __require(into::Module, mod::Symbol) @ Base .\loading.jl:2271 [4] #invoke_in_world#3 @ .\essentials.jl:1089 [inlined] [5] invoke_in_world @ .\essentials.jl:1086 [inlined] [6] require(into::Module, mod::Symbol) @ Base .\loading.jl:2260 [7] eval @ .\boot.jl:430 [inlined] [8] eval_string(x::String) @ Main.JuliaCall D:\RCompile\CRANpkg\lib\4.4\JuliaCall\julia\setup.jl:203 [9] docall(call1::Ptr{Nothing}) @ Main.JuliaCall D:\RCompile\CRANpkg\lib\4.4\JuliaCall\julia\setup.jl:176 Backtrace: ▆ 1. └─JuliaCall::julia_command("using NamedArrays") at test-named.R:44:5 2. └─julia$call(...) 3. └─julia$do.call(func_name, list(...), need_return, show_value) ── Error ('test-no-materialize.R:147:5'): named matrix colSums does not materialize ── Error: Error happens in Julia. ArgumentError: Package NamedArrays not found in current path. - Run `import Pkg; Pkg.add("NamedArrays")` to install the NamedArrays package. Stacktrace: [1] macro expansion @ .\loading.jl:2296 [inlined] [2] macro expansion @ .\lock.jl:273 [inlined] [3] __require(into::Module, mod::Symbol) @ Base .\loading.jl:2271 [4] #invoke_in_world#3 @ .\essentials.jl:1089 [inlined] [5] invoke_in_world @ .\essentials.jl:1086 [inlined] [6] require(into::Module, mod::Symbol) @ Base .\loading.jl:2260 [7] eval @ .\boot.jl:430 [inlined] [8] eval_string(x::String) @ Main.JuliaCall D:\RCompile\CRANpkg\lib\4.4\JuliaCall\julia\setup.jl:203 [9] docall(call1::Ptr{Nothing}) @ Main.JuliaCall D:\RCompile\CRANpkg\lib\4.4\JuliaCall\julia\setup.jl:176 Backtrace: ▆ 1. └─JuliaCall::julia_command("using NamedArrays") at test-no-materialize.R:147:5 2. └─julia$call(...) 3. └─julia$do.call(func_name, list(...), need_return, show_value) [ FAIL 5 | WARN 1 | SKIP 0 | PASS 302 ] Error: ! Test failures. Execution halted Julia exit. ┌ Warning: jlview: Int64 array contains values outside Float64's exact integer range (|x| > 2^53-1). Precision loss will occur. min=9007199254740993 max=9007199254740993 └ @ Main.JlviewSupport D:\RCompile\CRANpkg\lib\4.4\jlview\julia\jlview_support.jl:69 Flavor: r-oldrel-windows-x86_64

Package labNorm

Current CRAN status: NOTE: 14

Additional issues

donttest

Version: 1.0.1
Check: Rd files
Result: NOTE checkRd: (-1) ln_quantile_value.Rd:44: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) ln_quantile_value.Rd:45: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) ln_quantile_value.Rd:46: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) ln_quantile_value.Rd:47: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) ln_quantile_value.Rd:48: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) ln_quantile_value.Rd:49: Lost braces in \itemize; \value handles \item{}{} directly Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-macos-arm64, r-devel-windows-x86_64, r-patched-linux-x86_64, r-release-linux-x86_64, r-release-macos-arm64, r-release-macos-x86_64, r-release-windows-x86_64, r-oldrel-macos-arm64, r-oldrel-macos-x86_64, r-oldrel-windows-x86_64

Version: 1.0.1
Check: installed package size
Result: NOTE installed size is 5.4Mb sub-directories of 1Mb or more: R 5.2Mb Flavors: r-oldrel-macos-arm64, r-oldrel-macos-x86_64

Package misha

Current CRAN status: NOTE: 3, OK: 8

Additional issues

rchk

Version: 5.6.6
Check: compiled code
Result: NOTE File ‘misha/libs/misha.so’: Found non-API call to R: ‘R_UnboundValue’ Compiled code should not call non-API entry points in R. See ‘Writing portable packages’ in the ‘Writing R Extensions’ manual, and section ‘Moving into C API compliance’ for issues with the use of non-API entry points. Flavor: r-devel-linux-x86_64-debian-gcc

Version: 5.6.6
Check: installed package size
Result: NOTE installed size is 36.8Mb sub-directories of 1Mb or more: libs 34.8Mb Flavors: r-oldrel-macos-arm64, r-oldrel-macos-x86_64

Package naryn

Current CRAN status: NOTE: 2, OK: 9

Additional issues

rchk

Version: 2.6.34
Check: installed package size
Result: NOTE installed size is 11.1Mb sub-directories of 1Mb or more: libs 10.5Mb Flavors: r-oldrel-macos-arm64, r-oldrel-macos-x86_64

Package tglkmeans

Current CRAN status: OK: 11

Package tgstat

Current CRAN status: OK: 11

Additional issues

rchk