Last updated on 2026-01-29 23:49:26 CET.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 5.4.0 | 113.17 | 775.57 | 888.74 | OK | |
| r-devel-linux-x86_64-debian-gcc | 5.4.0 | 81.46 | 509.37 | 590.83 | OK | |
| r-devel-linux-x86_64-fedora-clang | 5.4.0 | 240.00 | 1372.84 | 1612.84 | OK | |
| r-devel-linux-x86_64-fedora-gcc | 5.4.0 | 240.00 | ERROR | |||
| r-devel-windows-x86_64 | 5.4.0 | 117.00 | 882.00 | 999.00 | OK | |
| r-patched-linux-x86_64 | 5.4.0 | 131.37 | 730.18 | 861.55 | OK | |
| r-release-linux-x86_64 | 5.4.0 | 112.95 | 733.68 | 846.63 | OK | |
| r-release-macos-arm64 | 5.4.0 | 24.00 | 154.00 | 178.00 | OK | |
| r-release-macos-x86_64 | 5.4.0 | 77.00 | 443.00 | 520.00 | OK | |
| r-release-windows-x86_64 | 5.4.0 | 116.00 | 853.00 | 969.00 | OK | |
| r-oldrel-macos-arm64 | 5.4.0 | 24.00 | 155.00 | 179.00 | NOTE | |
| r-oldrel-macos-x86_64 | 5.4.0 | 77.00 | 539.00 | 616.00 | NOTE | |
| r-oldrel-windows-x86_64 | 5.4.0 | 156.00 | 1180.00 | 1336.00 | NOTE |
Version: 5.4.0
Check: tests
Result: ERROR
Running ‘testthat.R’ [9m/36m]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> library(testthat)
> library(Seurat)
Loading required package: SeuratObject
Loading required package: sp
Attaching package: 'SeuratObject'
The following objects are masked from 'package:base':
intersect, t
> #
> # # Run tests for 'v3'
> # message('Run tests for v3 assay')
> # options(Seurat.object.assay.version = 'v3')
> # test_check("Seurat")
>
> # Run tests for 'v5'
> message('Run tests for v5 assay')
Run tests for v5 assay
> options(Seurat.object.assay.version = 'v5')
> test_check("Seurat")
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Modularity Optimizer version 1.3.0 by Ludo Waltman and Nees Jan van Eck
Number of nodes: 80
Number of edges: 525
Running Louvain algorithm...
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[----|----|----|----|----|----|----|----|----|----|
**************************************************|
Maximum modularity in 10 random starts: 0.8255
Number of communities: 6
Elapsed time: 0 seconds
Modularity Optimizer version 1.3.0 by Ludo Waltman and Nees Jan van Eck
Number of nodes: 80
Number of edges: 525
Running Louvain algorithm...
0% 10 20 30 40 50 60 70 80 90 100%
[----|----|----|----|----|----|----|----|----|----|
**************************************************|
Maximum modularity in 10 random starts: 0.8255
Number of communities: 6
Elapsed time: 0 seconds
Modularity Optimizer version 1.3.0 by Ludo Waltman and Nees Jan van Eck
Number of nodes: 80
Number of edges: 525
Running Louvain algorithm with multilevel refinement...
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[----|----|----|----|----|----|----|----|----|----|
**************************************************|
Maximum modularity in 10 random starts: 0.8255
Number of communities: 6
Elapsed time: 0 seconds
Modularity Optimizer version 1.3.0 by Ludo Waltman and Nees Jan van Eck
Number of nodes: 80
Number of edges: 525
Running smart local moving algorithm...
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[----|----|----|----|----|----|----|----|----|----|
**************************************************|
Maximum modularity in 10 random starts: 0.8255
Number of communities: 6
Elapsed time: 0 seconds
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Performing log-normalization
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Performing log-normalization
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Performing log-normalization
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Performing log-normalization
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**************************************************|
Calculating gene variances
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Calculating feature variances of standardized and clipped values
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**************************************************|
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Modularity Optimizer version 1.3.0 by Ludo Waltman and Nees Jan van Eck
Number of nodes: 80
Number of edges: 2045
Running Louvain algorithm...
0% 10 20 30 40 50 60 70 80 90 100%
[----|----|----|----|----|----|----|----|----|----|
**************************************************|
Maximum modularity in 10 random starts: -0.0613
Number of communities: 64
Elapsed time: 0 seconds
Performing log-normalization
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[----|----|----|----|----|----|----|----|----|----|
**************************************************|
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Flavor: r-devel-linux-x86_64-fedora-gcc
Version: 5.4.0
Check: package dependencies
Result: NOTE
Packages suggested but not available for checking:
'BPCells', 'glmGamPoi', 'MAST', 'monocle', 'presto'
Flavor: r-oldrel-macos-arm64
Version: 5.4.0
Check: installed package size
Result: NOTE
installed size is 11.2Mb
sub-directories of 1Mb or more:
R 2.1Mb
libs 8.2Mb
Flavors: r-oldrel-macos-arm64, r-oldrel-macos-x86_64
Version: 5.4.0
Check: Rd cross-references
Result: NOTE
Package unavailable to check Rd xrefs: ‘BPCells’
Flavors: r-oldrel-macos-arm64, r-oldrel-macos-x86_64, r-oldrel-windows-x86_64
Version: 5.4.0
Check: package dependencies
Result: NOTE
Packages suggested but not available for checking:
'BPCells', 'monocle', 'presto'
Flavor: r-oldrel-macos-x86_64
Version: 5.4.0
Check: package dependencies
Result: NOTE
Packages suggested but not available for checking: 'BPCells', 'presto'
Flavor: r-oldrel-windows-x86_64