Last updated on 2026-09-09 18:50:22 CEST.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 1.6 | 24.27 | 95.02 | 119.29 | OK | |
| r-devel-linux-x86_64-debian-gcc | 1.6 | 16.58 | 66.66 | 83.24 | OK | |
| r-devel-linux-x86_64-fedora-clang | 1.6 | 17.00 | 54.50 | 71.50 | NOTE | |
| r-devel-linux-x86_64-fedora-gcc | 1.6 | 19.00 | 62.21 | 81.21 | NOTE | |
| r-devel-windows-x86_64 | 1.6 | 32.00 | 179.00 | 211.00 | OK | |
| r-patched-linux-x86_64 | 1.4 | 3.35 | 70.85 | 74.20 | NOTE | |
| r-release-linux-x86_64 | 1.6 | 22.87 | 85.89 | 108.76 | OK | |
| r-release-macos-arm64 | 1.4 | 1.00 | 27.00 | 28.00 | NOTE | |
| r-release-macos-x86_64 | 1.6 | 16.00 | 96.00 | 112.00 | OK | |
| r-release-windows-x86_64 | 1.6 | 37.00 | 119.00 | 156.00 | OK | |
| r-oldrel-macos-arm64 | 1.6 | 5.00 | 35.00 | 40.00 | OK | |
| r-oldrel-macos-x86_64 | 1.6 | 16.00 | 99.00 | 115.00 | OK | |
| r-oldrel-windows-x86_64 | 1.6 | 35.00 | 138.00 | 173.00 | OK |
Version: 1.6
Check: dependencies in R code
Result: NOTE
Namespace in Imports field not imported from: ‘ade4’
All declared Imports should be used.
Flavors: r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc
Version: 1.4
Check: Rd files
Result: NOTE
checkRd: (-1) pbd_loglik.Rd:31: Lost braces
31 | \code{pars2[1]} {set the conditioning on non-extinction of the clade (1) or not (0) \cr \cr}
| ^
checkRd: (-1) pbd_loglik.Rd:32: Lost braces
32 | \code{pars2[2]} {sets whether the likelihood is for the branching times (0) or the phylogeny (1) \cr \cr}
| ^
checkRd: (-1) pbd_loglik.Rd:33: Lost braces
33 | \code{pars2[3]} {sets whether the first element of the branching times is the stem (1) or the crown (2) age \cr \cr}
| ^
checkRd: (-1) pbd_loglik.Rd:34: Lost braces
34 | \code{pars2[4]} {sets whether the parameters and likelihood should be shown on screen (1) or not (0) \cr \cr}
| ^
checkRd: (-1) pbd_loglik.Rd:35: Lost braces
35 | \code{pars2[5]} {sets which method should be used in the ode-solver. Default is 'lsoda'. See package deSolve for details. \cr \cr}
| ^
checkRd: (-1) pbd_loglik.Rd:36: Lost braces
36 | \code{pars2[6]}{Sets the lower bound of the number of species on which conditioning should be done when cond = 2. Set this to 0 when conditioning should be done on precisely the number of species (default)\cr \cr}
| ^
checkRd: (-1) pbd_loglik.Rd:37: Lost braces
37 | \code{pars2[7]}{Sets the upper bound of the number of species on which conditioning should be done when cond = 2. Set this to 0 when conditioning should be done on precisely the number of species (default)\cr \cr}
| ^
Flavors: r-patched-linux-x86_64, r-release-macos-arm64