CRAN Package Check Results for Package CohortGenerator

Last updated on 2026-05-17 06:50:50 CEST.

Flavor Version Tinstall Tcheck Ttotal Status Flags
r-devel-linux-x86_64-debian-clang 1.1.0 17.53 272.28 289.81 OK
r-devel-linux-x86_64-debian-gcc 1.1.0 12.50 191.35 203.85 OK
r-devel-linux-x86_64-fedora-clang 1.1.0 31.00 421.53 452.53 OK
r-devel-linux-x86_64-fedora-gcc 1.1.0 30.00 474.33 504.33 OK
r-devel-windows-x86_64 1.1.0 20.00 321.00 341.00 OK
r-patched-linux-x86_64 1.1.0 17.80 285.40 303.20 OK
r-release-linux-x86_64 1.1.0 18.13 277.88 296.01 ERROR
r-release-macos-arm64 1.1.0 4.00 90.00 94.00 OK
r-release-macos-x86_64 1.1.0 12.00 385.00 397.00 OK
r-release-windows-x86_64 1.1.0 19.00 323.00 342.00 OK
r-oldrel-macos-arm64 1.1.0 4.00 94.00 98.00 OK
r-oldrel-macos-x86_64 1.1.0 12.00 284.00 296.00 OK
r-oldrel-windows-x86_64 1.1.0 25.00 406.00 431.00 OK

Check Details

Version: 1.1.0
Check: re-building of vignette outputs
Result: ERROR Error(s) in re-building vignettes: ... --- re-building ‘CreatingCohortSubsetDefinitions.Rmd’ using rmarkdown Quitting from CreatingCohortSubsetDefinitions.Rmd:190-212 [unnamed-chunk-8] ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ <error/rlang_error> Error: ! 'duckdb' must be installed for this functionality. --- Backtrace: ▆ 1. └─DatabaseConnector::connect(duckdbConnectionDetails) 2. └─DatabaseConnector:::connectDuckdb(connectionDetails) 3. └─DatabaseConnector:::ensure_installed("duckdb") ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ Error: processing vignette 'CreatingCohortSubsetDefinitions.Rmd' failed with diagnostics: 'duckdb' must be installed for this functionality. --- failed re-building ‘CreatingCohortSubsetDefinitions.Rmd’ --- re-building ‘GeneratingCohorts.Rmd’ using rmarkdown trying URL 'https://raw.githubusercontent.com/OHDSI/EunomiaDatasets/main/datasets/GiBleed/GiBleed_5.3.zip' Content type 'application/zip' length 6861852 bytes (6.5 MB) ================================================== downloaded 6.5 MB --- finished re-building ‘GeneratingCohorts.Rmd’ --- re-building ‘SamplingCohorts.Rmd’ using rmarkdown --- finished re-building ‘SamplingCohorts.Rmd’ --- re-building ‘UsingTemplateCohorts.Rmd’ using rmarkdown trying URL 'https://raw.githubusercontent.com/OHDSI/EunomiaDatasets/main/datasets/GiBleed/GiBleed_5.3.zip' Content type 'application/zip' length 6861852 bytes (6.5 MB) ================================================== downloaded 6.5 MB --- finished re-building ‘UsingTemplateCohorts.Rmd’ SUMMARY: processing the following file failed: ‘CreatingCohortSubsetDefinitions.Rmd’ Error: Vignette re-building failed. Execution halted Flavor: r-release-linux-x86_64

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