Last updated on 2025-12-20 11:50:13 CET.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 0.8.1 | 19.58 | 106.33 | 125.91 | ERROR | |
| r-devel-linux-x86_64-debian-gcc | 0.8.1 | 12.44 | 66.07 | 78.51 | ERROR | |
| r-devel-linux-x86_64-fedora-clang | 0.8.1 | 32.00 | 162.25 | 194.25 | ERROR | |
| r-devel-linux-x86_64-fedora-gcc | 0.8.1 | 30.00 | 169.89 | 199.89 | ERROR | |
| r-devel-windows-x86_64 | 0.8.1 | 18.00 | 182.00 | 200.00 | NOTE | |
| r-patched-linux-x86_64 | 0.8.1 | 21.93 | 101.58 | 123.51 | NOTE | |
| r-release-linux-x86_64 | 0.8.1 | 16.36 | 102.58 | 118.94 | NOTE | |
| r-release-macos-arm64 | 0.8.1 | NOTE | ||||
| r-release-macos-x86_64 | 0.8.1 | 13.00 | 148.00 | 161.00 | NOTE | |
| r-release-windows-x86_64 | 0.8.1 | 19.00 | 116.00 | 135.00 | NOTE | |
| r-oldrel-macos-arm64 | 0.8.1 | NOTE | ||||
| r-oldrel-macos-x86_64 | 0.8.1 | 13.00 | 112.00 | 125.00 | NOTE | |
| r-oldrel-windows-x86_64 | 0.8.1 | 26.00 | 149.00 | 175.00 | NOTE |
Version: 0.8.1
Check: CRAN incoming feasibility
Result: NOTE
Maintainer: ‘Dan Dediu <ddediu@gmail.com>’
Package CITATION file contains call(s) to old-style personList() or
as.personList(). Please use c() on person objects instead.
Package CITATION file contains call(s) to old-style citEntry(). Please
use bibentry() instead.
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc
Version: 0.8.1
Check: Rd files
Result: NOTE
checkRd: (-1) med.groups.Rd:20: Lost braces; missing escapes or markup?
20 | medication groups using the construction \emph{"{NAME}"}.
| ^
checkRd: (-1) med.groups.Rd:26: Lost braces; missing escapes or markup?
26 | Another example is "NotVita" defined as "(!{Vitamines})", which selects all
| ^
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-windows-x86_64, r-patched-linux-x86_64, r-release-linux-x86_64, r-release-macos-arm64, r-release-macos-x86_64, r-release-windows-x86_64, r-oldrel-macos-arm64, r-oldrel-macos-x86_64, r-oldrel-windows-x86_64
Version: 0.8.1
Check: examples
Result: ERROR
Running examples in ‘AdhereR-Ex.R’ failed
The error most likely occurred in:
> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: CMA8
> ### Title: CMA8 constructor.
> ### Aliases: CMA8
>
> ### ** Examples
>
> cma8 <- CMA8(data=med.events,
+ ID.colname="PATIENT_ID",
+ event.date.colname="DATE",
+ event.duration.colname="DURATION",
+ event.daily.dose.colname="PERDAY",
+ medication.class.colname="CATEGORY",
+ carry.only.for.same.medication=FALSE,
+ consider.dosage.change=FALSE,
+ followup.window.start=30,
+ observation.window.start=30,
+ observation.window.duration=365,
+ date.format="%m/%d/%Y"
+ );
Error in `[.data.table`(event.info, , `:=`(.OBS.START.DATE.UPDATED, .new.OW.start(.SD)), :
attempt access index 23/23 in VECTOR_ELT
Calls: CMA8 ... .cma.skeleton -> .compute.function -> fnc -> [ -> [.data.table
Execution halted
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc
Version: 0.8.1
Check: re-building of vignette outputs
Result: ERROR
Error(s) in re-building vignettes:
...
--- re-building ‘AdhereR-overview.Rmd’ using rmarkdown
Quitting from AdhereR-overview.Rmd:481-496 [unnamed-chunk-15]
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
<error/rlang_error>
Error in `[.data.table`:
! attempt access index 23/23 in VECTOR_ELT
---
Backtrace:
▆
1. └─AdhereR::CMA8(...)
2. └─AdhereR:::.cma.skeleton(...)
3. └─AdhereR:::.compute.function(...)
4. └─AdhereR (local) fnc(...)
5. ├─...[]
6. └─data.table:::`[.data.table`(...)
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
Error: processing vignette 'AdhereR-overview.Rmd' failed with diagnostics:
attempt access index 23/23 in VECTOR_ELT
--- failed re-building ‘AdhereR-overview.Rmd’
--- re-building ‘calling-AdhereR-from-python3.Rmd’ using rmarkdown
[WARNING] Deprecated: --highlight-style. Use --syntax-highlighting instead.
--- finished re-building ‘calling-AdhereR-from-python3.Rmd’
--- re-building ‘adherer_with_databases.pdf.asis’ using asis
--- finished re-building ‘adherer_with_databases.pdf.asis’
SUMMARY: processing the following file failed:
‘AdhereR-overview.Rmd’
Error: Vignette re-building failed.
Execution halted
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc
Version: 0.8.1
Check: examples
Result: ERROR
Running examples in ‘AdhereR-Ex.R’ failed
The error most likely occurred in:
> ### Name: CMA8
> ### Title: CMA8 constructor.
> ### Aliases: CMA8
>
> ### ** Examples
>
> cma8 <- CMA8(data=med.events,
+ ID.colname="PATIENT_ID",
+ event.date.colname="DATE",
+ event.duration.colname="DURATION",
+ event.daily.dose.colname="PERDAY",
+ medication.class.colname="CATEGORY",
+ carry.only.for.same.medication=FALSE,
+ consider.dosage.change=FALSE,
+ followup.window.start=30,
+ observation.window.start=30,
+ observation.window.duration=365,
+ date.format="%m/%d/%Y"
+ );
Error in `[.data.table`(event.info, , `:=`(.OBS.START.DATE.UPDATED, .new.OW.start(.SD)), :
attempt access index 23/23 in VECTOR_ELT
Calls: CMA8 ... .cma.skeleton -> .compute.function -> fnc -> [ -> [.data.table
Execution halted
Flavors: r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc
Version: 0.8.1
Check: re-building of vignette outputs
Result: ERROR
Error(s) in re-building vignettes:
--- re-building ‘AdhereR-overview.Rmd’ using rmarkdown
Quitting from AdhereR-overview.Rmd:481-496 [unnamed-chunk-15]
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
<error/rlang_error>
Error in `[.data.table`:
! attempt access index 23/23 in VECTOR_ELT
---
Backtrace:
▆
1. └─AdhereR::CMA8(...)
2. └─AdhereR:::.cma.skeleton(...)
3. └─AdhereR:::.compute.function(...)
4. └─AdhereR (local) fnc(...)
5. ├─...[]
6. └─data.table:::`[.data.table`(...)
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
Error: processing vignette 'AdhereR-overview.Rmd' failed with diagnostics:
attempt access index 23/23 in VECTOR_ELT
--- failed re-building ‘AdhereR-overview.Rmd’
--- re-building ‘calling-AdhereR-from-python3.Rmd’ using rmarkdown
[WARNING] Deprecated: --highlight-style. Use --syntax-highlighting instead.
--- finished re-building ‘calling-AdhereR-from-python3.Rmd’
--- re-building ‘adherer_with_databases.pdf.asis’ using asis
--- finished re-building ‘adherer_with_databases.pdf.asis’
SUMMARY: processing the following file failed:
‘AdhereR-overview.Rmd’
Error: Vignette re-building failed.
Execution halted
Flavors: r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc
Version: 0.8.1
Check: installed package size
Result: NOTE
installed size is 6.2Mb
sub-directories of 1Mb or more:
doc 3.7Mb
Flavors: r-oldrel-macos-arm64, r-oldrel-macos-x86_64, r-oldrel-windows-x86_64