| eggCounts-package | Hierarchical modelling of faecal egg counts |
| epgs | Faecal egg count samples (before and after treatment) |
| fecrtCI | Compute standard FECRT according to WAAVP guidelines |
| fecr_probs | Compute probability of the reduction parameter relative to a given threshold |
| fecr_stan | Model the reduction of faecal egg count |
| fecr_stanExtra | Model the reduction of faecal egg count using custom models |
| fecr_stanSimple | Model the reduction of faecal egg count using a simple Bayesian model |
| fec_stan | Modelling of faecal egg count data (one-sample case) |
| getPrior_delta | Get prior parameters from Beta distribution |
| getPrior_mu | Get prior parameters from Gamma distribution |
| plotCounts | Plot faecal egg count data |
| simData1s | Simulate faecal egg count data (1-sample situation) |
| simData2s | Simulate faecal egg count data (2-sample situation) |
| stan2mcmc | Convert a Stanfit object to a MCMC object |