# An 'Shiny' App for Exploring scRNA-seq Data Processed in 'Seurat'

## Documentation for package ‘SeuratExplorer’ version 0.1.4

- DESCRIPTION file

## Help Pages

cellRatioPlot | plot cell percentage barplot
explorer_body_ui | generate the body UI for each menu item specified in 'explorer_sidebar_ui'
explorer_server | server side functions related to 'explorer_sidebar_ui'
explorer_sidebar_ui | some menu items of the dashboard sidebar
getColors | getColors
get_counts_matrix | Helper function to extract counts matrix with proper handling
get_data_matrix | Helper function to extract data matrix with proper handling
join_layers_if_needed | Helper function to join layers for Assay5 objects
launchSeuratExplorer | Launch shiny app
prepare_gene_annotations | extract the features from row names or annotation slot of assays
server | Server
top_genes | Find Top Genes by Cell
ui | UI