Conditional Independence Testing with Cumulative Distribution Functions

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Documentation for package ‘citcdf’ version 1.1.0

• DESCRIPTION file.
• User guides, package vignettes and other documentation.
• Package NEWS.

Help Pages

ccdf	Estimate the empirical conditional cumulative distribution function
cit_asymp	Asymptotic test for conditional independence
cit_gsa	Conditional independence test for gene set analysis
cit_multi	Multiple conditional independence testing
cit_perm	Permutation test for conditional independence
perm_cont	Permutation procedure when Z is continuous
plot.cit_gsa	Plot the conditional CDFs of every gene in a gene set
plot.cit_multi	Plot of gene-wise p-values
plot_compare_ccdf	Function to plot the CCDF according to the type of X and Z
X_perm	Compute the conditional permutations