Package: EpiExposure
Type: Package
Title: Exposure-Lag-Response Modeling for Plant Disease Epidemiology
Version: 0.1.0
Authors@R: c(person(
  given = "Ricardo Gomes",
  family = "Tomáz",
  email = "ricardogomesagro@gmail.com",
  role = c("aut", "cre"),
  comment = c(ORCID = "0000-0001-7708-4263")),
 person(given = "Emerson M.", 
          family = "Del Ponte", 
          role = "aut",
          email = "delponte@ufv.br",
          comment = c(ORCID = "0000-0003-4398-409X")),
  person(given = "Felipe",
         family = "Dalla Lana",
         role = "aut",
         email = "FDallaLana@agcenter.lsu.edu",
         comment = c("ORCID" = "0000-0002-3112-6197")))
Description: Supports modeling and interpretation of environmental
    exposure-lag-response relationships in plant disease epidemiology using
    distributed lag non-linear models (DLNMs). Provides functions for defining
    complete exposure profiles, evaluating model identifiability, summarizing
    lag-specific and period-specific effects, performing sensitivity analyses,
    simulating environmental exposure scenarios, predicting plant disease
    outcomes, quantifying yield and economic losses, and evaluating individual
    and ensemble models. Supports harmonized frequentist and Bayesian modeling
    workflows. Builds on the framework implemented in the 'dlnm' package and
    described by Gasparrini (2011) <doi:10.18637/jss.v043.i08>.
Depends: R (>= 4.1)
Imports: dlnm, stats, glmmTMB, brms, spaMM, rlang, mgcv, nlme, ggplot2,
        scales
Suggests: dplyr, tidyr, purrr, tidyselect, INLA, knitr, rmarkdown,
        testthat (>= 3.0.0), pkgdown, readxl, patchwork, metR, bdlnm,
        cowplot, future, sn, future.apply
Additional_repositories: https://inla.r-inla-download.org/R/stable
License: MIT + file LICENSE
Encoding: UTF-8
LazyData: true
LazyDataCompression: xz
VignetteBuilder: knitr
URL: https://github.com/tomazrg/EpiExposure,
        https://tomazrg.github.io/EpiExposure/
BugReports: https://github.com/tomazrg/EpiExposure/issues
Config/testthat/edition: 3
RoxygenNote: 7.3.3
NeedsCompilation: no
Packaged: 2026-10-23 03:10:21 UTC; RTomaz
Author: Ricardo Gomes Tomáz [aut, cre] (ORCID:
    <https://orcid.org/0000-0001-7708-4263>),
  Emerson M. Del Ponte [aut] (ORCID:
    <https://orcid.org/0000-0003-4398-409X>),
  Felipe Dalla Lana [aut] (ORCID:
    <https://orcid.org/0000-0002-3112-6197>)
Maintainer: Ricardo Gomes Tomáz <ricardogomesagro@gmail.com>
Repository: CRAN
Date/Publication: 2026-11-06 13:00:22 UTC
Built: R 4.5.3; ; 2026-11-06 16:41:33 UTC; windows
