| addspace | Add spaces to strings in LaTeX |
| boxcoxfitRx | fit box cox transformed linear model |
| cap | Capitalize a string |
| clear_labels | Clear variable labels from a data frame |
| covsum | Get covariate summary dataframe |
| crrRx | fit crr model |
| ctDNA | Tumour size change over time Longitudinal changes in tumour size since baseline for patients by changes in ctDNA status (clearance, decrease or increase) since baseline. |
| excelCol | Retrieve columns number from spreadsheet columns specified as unquoted letters |
| excelColLetters | Retrieve spreadsheet column letter-names from columns indices |
| extract_labels | Extract variable labels from labelled data frame |
| forestplot2 | Create a forest plot using ggplot2 |
| forestplotMV | Create a multivariable forest plot using ggplot2 |
| forestplotUV | Create an univariable forest plot using ggplot2 |
| forestplotUVMV | Combine an univariable and multivariable forest plot using ggplot2 |
| formatp | Specific p-value formatting |
| geoR_boxcoxfit | Parameter Estimation for the Box-Cox Transformation |
| ggkmcif | Plot KM and CIF curves with ggplot |
| ggkmcif2 | Plot KM and CIF curves with ggplot |
| ggkmcif2Parameters | Additional parameters passed to ggkmcif2 |
| ggkmcif_paste | Plot KM and CIF curves with ggplot |
| hbld | Bold strings in HTML |
| lbld | Bold strings in LaTeX |
| lpvalue | Formats p-values for LaTeX |
| mvsum | Get multivariate summary dataframe |
| nestTable | Combine two table columns into a single column with levels of one nested within levels of the other. |
| nicename | Lean strings for printing |
| niceNum | Round retaining digits |
| outTable | Print tables to PDF/Latex HTML or Word |
| pembrolizumab | Survival data Survival status and ctDNA levels for patients receiving pembrolizumab |
| plotuv | Plot multiple bivariate relationships in a single plot |
| psthr | Round and paste with parentheses |
| pstprn | Paste with parentheses |
| pvalue | Formats p-values |
| rmds | Replace dollar signs with html for proper HTML output |
| rm_cifsum | Summarize cumulative incidence by group |
| rm_covsum | Outputs a descriptive covariate table |
| rm_mvsum | Format a regression model nicely for 'Rmarkdown' |
| rm_survdiff | Display event counts, expected event counts and logrank test of differences |
| rm_survsum | Summarise survival data by group |
| rm_survtime | Display survival rates and events for specified times |
| rm_uvsum | Output several univariate models nicely in a single table |
| rm_uv_mv | Combine univariate and multivariable regression tables |
| sanitizestr | Sanitizes strings to not break LaTeX |
| set_labels | Set variable labels |
| set_var_labels | Set variable labels |
| testData | Funky ctDNA data There is a weird factor with all one level, the cohort variable contains a cohort level (and Cohort A) and for one cohort all the size changes are missing |
| uvsum | Get univariate summary dataframe |