| Fluidigm-package | Fluidigm |
| calculatePairwiseSimilarities | Run plink to Calculate Pairwise Similarities |
| estimateErrors | Estimate Errors in 'PLINK" ped files |
| Fluidigm | Fluidigm |
| fluidigm2PLINK | Convert Fluidigm Output to 'PLINK' Format |
| fluidigmAnalysisWrapper | Run the Fluidigm Analysis Script Together |
| getPairwiseSimilarityLoci | Get Pairwise Similarity Loci |
| similarityMatrix | Calculate the similarity matrix |