Data Package for 'pathfindR'
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Documentation for package ‘pathfindR.data’ version 1.1.3
Help Pages
| biocarta_descriptions | BioCarta Pathways - Descriptions |
| biocarta_genes | BioCarta Pathways - Gene Sets |
| cell_markers_descriptions | Human Cell Markers - Descriptions |
| cell_markers_gsets | Human Cell Markers - Gene Sets |
| custom_result | Custom Gene Set Enrichment Results |
| example_active_snws | Example Active Subnetworks |
| go_all_genes | Gene Ontology - All Gene Ontology Gene Sets |
| kegg_descriptions | KEGG Pathways - Descriptions |
| kegg_genes | KEGG Pathways - Gene Sets |
| mmu_kegg_descriptions | Mus Musculus KEGG Pathways - Descriptions |
| mmu_kegg_genes | Mus Musculus KEGG Pathways - Gene Sets |
| myeloma_input | Example Input for Myeloma Analysis (Mus Musculus) |
| myeloma_output | Example Output for Myeloma Analysis (Mus Musculus) |
| pathfindR.data_updates | Table of Data for pathfindR |
| RA_clustered | Example Output for the pathfindR Clustering Workflow - Rheumatoid Arthritis |
| RA_comparison_output | Second Example Output for the pathfindR Enrichment Workflow |
| RA_exp_mat | Example Input for pathfindR - Enriched Term Scoring |
| RA_input | Example Input for the pathfindR Enrichment Workflow - Rheumatoid Arthritis |
| RA_output | Example Output for the pathfindR Enrichment Workflow - Rheumatoid Arthritis |
| reactome_descriptions | Reactome Pathways - Descriptions |
| reactome_genes | Reactome Pathways - Gene Sets |