| AR1 |
Correlation matrix of an autoregressive model of order 1 |
| calcvar |
Variance of estimator |
| coeff.beta.k |
Ratio of expected value to variance of estimator |
| CovarMatrix |
Calculation of covariance matrices from maternal and paternal LD |
| CovMat |
Calculation of covariance or correlation matrix |
| ExpectMat |
Expected value of paternally inherited allele |
| H.sire |
testdata: sire haplotypes |
| Haplo2Geno |
Conversion of haplotypes into genotypes |
| LDdam |
Calculation of maternal LD matrix |
| LDsire |
Calculation of paternal LD matrix |
| matLD |
testdata: maternal linkage disequilibrium |
| pos.chr |
testdata: genetic map positions |
| pwr.normtest |
Probability under alternative hypothesis (power) |
| pwr.snpblup |
Wrapper function for sample size calculation |
| search.best.n.bisection |
Method of bisection for estimating optimal sample size |
| simpleM |
Calculation of effective number of independent tests |
| startvalue |
Start value for estimating optimal sample size |
| tagSNP |
tagSNP |
| testdata |
Description of the testdata |
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