| ConsensusLoops | Subset an object of class LoopRanges using consensus options |
| DropLoops | Drop loops from _LoopRanges_ objects using anchor and loop sizes |
| ElementsToRanges | Create a list of ranges objects from element data |
| ExportBED | Export a LoopRanges or _italics_ElementRanges object to a BED/BEDPE file |
| LinkedElements | Determines elements linked by loop anchors |
| LoopsToRanges | Create a list of ranges objects from looping data |
| ScaffoldElements | Finds elements within loops scaffolded by another set of elements |
| StackedElements | Finds elements stacked atop loop anchors |