| cif_est_usual | Estimating Three Cumulative Incidence Functions Using the Usual Markov Model |
| doPS | Generate the Inverse Probability Treatment Weights |
| em_illness_death_phmm_weight | Using EM Type Algorithm for MSM Illness-death General Markov Model |
| get_hazard | Compute the (Cumulative) Baseline Hazard from Cox Model |
| get_hazard_offset_weights | Compute the (Cumulative) Baseline Hazard from Cox Model with Offsets |
| initial_fit_em_weights | Fit the MSM Cox Model with IP Weights |
| initial_lambda_em | Compute the Initial (Cumulative) Baseline Hazard From the MSM Illness-death Model |
| OUT_em_weights | Initial Value For Fitting the General Markov Model |
| plot.PS | Plotting Histogram of Propensity Score and Balancing Plot for Covariates in the Propensity Score Model |
| sim_cox_msm_semicmrsk | Simulating Semi-competing Risks with Right-censored Survival Data under Marginal Structural Illness-death Cox Model |
| usual_illness_death_weight | Fit MSM Illness-death Usual Markov Model For Semi-competing Risks Data |
| var_em_illness_death_phmm | Variance of parameters in MSM Illness-death General Markov Model |