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| ORdensity-package | Automated discovery of differentially expressed genes |
| findDEgenes | Clustering of the potential differentially expressed (DE) genes |
| findDEgenes-method | Clustering of the potential differentially expressed (DE) genes |
| ORdensity | S4 class for representing potential differentially expressed genes |
| ORdensity-class | S4 class for representing potential differentially expressed genes |
| plot.ORdensity | Plot function implemented by ORdensity class |
| preclusteredData | Preprocessed description of all the identified potential DE genes |
| preclusteredData-method | Preprocessed description of all the identified potential DE genes |
| simexpr | Simulated data with differentially expressed (DE) genes |
| summary.ORdensity | Summary function implemented by ORdensity class |