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| AUC | ROC curves |
| aux.biom | Auxiliary functions in the biomarker package |
| biom.options | Set or return options for stability-based biomarker selection |
| coef.BMark | Get biomarkers discriminating between two classes |
| gen.data | Simulate data sets |
| gen.data2 | Simulate data sets |
| get.biom | Get biomarkers discriminating between two classes |
| get.segments | Subsampling segments |
| HCthresh | Biomarker thresholding by Higher Criticism |
| identify.ROC | ROC curves |
| lasso.coef | Auxiliary functions in the biomarker package |
| lasso.stab | Auxiliary functions in the biomarker package |
| lines.ROC | ROC curves |
| neg.markers | Spike-in metabolomics data for apple extracts |
| pcr.coef | Auxiliary functions in the biomarker package |
| pcr.stab | Auxiliary functions in the biomarker package |
| plot.ROC | ROC curves |
| pls.coef | Auxiliary functions in the biomarker package |
| pls.stab | Auxiliary functions in the biomarker package |
| points.ROC | ROC curves |
| pos.markers | Spike-in metabolomics data for apple extracts |
| print.BMark | Get biomarkers discriminating between two classes |
| print.ROC | ROC curves |
| pval.pcr | Auxiliary functions in the biomarker package |
| pval.plsvip | Auxiliary functions in the biomarker package |
| ROC | ROC curves |
| ROC.default | ROC curves |
| roc.value | ROC curves |
| scalefun | Different forms of scaling |
| selection | Accessor function to the selected variables of a BioMark object |
| shrinkt.coef | Auxiliary functions in the biomarker package |
| shrinkt.stab | Auxiliary functions in the biomarker package |
| SpikedApple | Spike-in metabolomics data for apple extracts |
| spikedApples | Metabolomics data on spiked apples |
| SpikeNeg | Spike-in metabolomics data for apple extracts |
| SpikePos | Spike-in metabolomics data for apple extracts |
| studentt.coef | Auxiliary functions in the biomarker package |
| studentt.stab | Auxiliary functions in the biomarker package |
| summary.BMark | Get biomarkers discriminating between two classes |
| traceplot | Plot the coefficient or stability trace for the lasso/elastic net biomarker selection. |
| vip.coef | Auxiliary functions in the biomarker package |
| vip.stab | Auxiliary functions in the biomarker package |