# Extended Generalised Linear Hidden Markov Models

## Documentation for package ‘eglhmm’ version 0.0-23

- DESCRIPTION file.
- User guides, package vignettes and other documentation.

## Help Pages

anova.eglhmm | Test for a difference between two fitted 'eglhmm' models.
bcov | Bootstrap covariance.
eglhmm | Fit (extended) generalised linear hidden Markov models.
fitted.eglhmm | Predict method for extended generalised linear hidden Markov models.
ic25kHz_12_sgmnt1 | Ion channel data
ic25kHz_13_sgmnt2 | Ion channel data
ic25kHz_14_sgmnt2 | Ion channel data
ic25kHz_15_sgmnt2 | Ion channel data
ic50kHz_06_sgmnt2 | Ion channel data
ic50kHz_08_sgmnt2 | Ion channel data
ic50kHz_09_sgmnt1 | Ion channel data
ic50kHz_10_sgmnt1 | Ion channel data
ionChannelData | Ion channel data
plot.eglhmm | Plot the results of an eglhmm fit.
postHocGradHess | Obtain gradient and Hessian, post hoc.
print.kitty | Specialised print methods.
print.RhoExpForm | Specialised print methods.
print.RhoProbForm | Specialised print methods.
reglhmm | Simulate data from a hidden generalised linear Markov model.
reglhmm.default | Simulate data from a hidden generalised linear Markov model.
reglhmm.eglhmm | Simulate data from a hidden generalised linear Markov model.
reorder.eglhmm | Reorder the states of a fitted eglhmm model
SydColCount | Sydney coliform bacteria data
SydColDisc | Sydney coliform bacteria data