Biologically Explainable Machine Learning Framework

Documentation for package ‘BioM2’ version 1.0.1

AddUnmapped	Add unmapped probe
baseModel	Prediction by Machine Learning
BioM2	Biologically Explainable Machine Learning Framework
FindParaModule	Find suitable parameters for partitioning pathways modules
GO2ALLEGS_BP	An example about pathlistDB
GO_Ancestor	Pathways in the GO database and their Ancestor
GO_Ancestor_exact	Pathways in the GO database and their Ancestor
MethylAnno	An example about FeatureAnno
MethylData_Test	An example about TrainData/TestData
PathwaysModule	Delineate differential pathway modules with high biological interpretability
ShowModule	Display biological information within each pathway module
Stage1_FeartureSelection	Stage 1 Fearture Selection
Stage2_FeartureSelection	Stage 2 Fearture Selection
VisMulti	Visualization of the results of functions in the BioM2 package