all_summary	all_summary
arguments_call1	arguments_call1
arguments_call2	arguments_call2
arguments_call3	arguments_call3
arg_df	arg_df
arg_UN_FD	arg_UN_FD
average_timecourse	average_timecourse
ave_timepoint	ave_timepoint
av_tc	av_tc
av_tp	av_tp
backHX_calculations	backHX_calculations
boxplot_tp	boxplot_tp
CI_2pts	CI_2pts
CI_single	CI_single
CI_tc	CI_tc
CI_tp	CI_tp
color_ranges_Blue_Red_heat_map	color_ranges_Blue_Red_heat_map
color_ranges_Spectral	color_ranges_Spectral
coverage_residue	coverage_residue
deuteration_woods_timecourse	deuteration_woods_timecourse
deuteration_woods_timepoints	deuteration_woods_timepoints
dif_ave	dif_ave
dif_tp	dif_tp
dif_tp_proc	dif_tp_proc
duplicate_sets	duplicate_sets
extreme_input_gap	extreme_input_gap
extreme_input_undeut	extreme_input_undeut
general_info	general_info
getCoords1	getCoords1
heat_map_tc	heat_map_tc
heat_map_tp	heat_map_tp
heat_map_tp_maxuptake	heat_map_tp_maxuptake
heat_map_tp_maxuptake_proc	heat_map_tp_maxuptake_proc
heat_map_tp_proc	heat_map_tp_proc
is.nan.data.frame	is.nan.data.frame
lab_dif	lab_dif
lab_dif_proc	lab_dif_proc
lab_vol	lab_vol
legend_heat_map	legend_heat_map
legend_heat_map_tc	legend_heat_map_tc
legend_heat_map_timecourse	legend_heat_map_timecourse
legend_heat_map_tp	legend_heat_map_tp
legend_heat_map_tp_proc	legend_heat_map_tp_proc
legend_nm_bottom	legend_nm_bottom
legend_raw_ave	legend_raw_ave
legend_raw_ave_proc	legend_raw_ave_proc
legend_raw_ave_tc	legend_raw_ave_tc
legend_sig_peptides	legend_sig_peptides
legend_states_PerD_bottom	legend_states_PerD_bottom
legend_tc_bottom	legend_tc_bottom
nm_states	nm_states
output_FD	output_FD
output_FD_proc	output_FD_proc
output_prep	output_prep
output_tc	output_tc
output_tp	output_tp
output_UD	output_UD
output_UD_proc	output_UD_proc
pallette_legend	pallette_legend
pallette_ll	pallette_ll
peptide_pv_tp	peptide_pv_tp
peptide_pv_tp_proc	peptide_pv_tp_proc
plots_av_tcourse	plots_av_tcourse
plots_av_tp	plots_av_tp
plots_av_tp_proc	plots_av_tp_proc
plots_diff_tp	plots_diff_tp
plots_diff_tp_proc	plots_diff_tp_proc
plots_vol_tp	plots_vol_tp
plot_heat_map_max_uptake_tp	plot_heat_map_max_uptake_tp
plot_heat_map_max_uptake_tp_proc	plot_heat_map_max_uptake_tp_proc
plot_heat_map_tc	plot_heat_map_tc
plot_heat_map_tp	plot_heat_map_tp
plot_heat_map_tp_proc	plot_heat_map_tp_proc
plot_peptide_sig_tp	plot_peptide_sig_tp
plot_peptide_sig_tp_proc	plot_peptide_sig_tp_proc
pl_gen_ch2	pl_gen_ch2
pl_gen_uptake	pl_gen_uptake
ppar	ppar
pparLM	pparLM
ppar_bottom_legend	ppar_bottom_legend
ppar_wider	ppar_wider
prep_timecourse_plot_ave	prep_timecourse_plot_ave
prep_timecourse_plot_sd	prep_timecourse_plot_sd
pv_timecourse	pv_timecourse
pv_timepoint	pv_timepoint
pymol_script_average_residue	pymol_script_average_residue
pymol_script_significant_peptide	pymol_script_significant_peptide
pymol_script_significant_peptide_proc	pymol_script_significant_peptide_proc
pymol_script_significant_residue	pymol_script_significant_residue
pymol_script_significant_residue_proc	pymol_script_significant_residue_proc
pymol_str	pymol_str
qpcr.cbind.na	qpcr.cbind.na
ranges_function	ranges_function
ranges_function_tc	ranges_function_tc
rbind_na	rbind_na
reset_par	reset_par
robot_2states_indexes	robot_2states_indexes
robot_indexes	robot_indexes
robot_indexes_df	robot_indexes_df
robot_plot_All	robot_plot_All
sd_timecourse	sd_timecourse
sd_timecourse_proc	sd_timecourse_proc
sd_timepoint	sd_timepoint
select_indices	select_indices
significant_peptide_uptake	significant_peptide_uptake
summary_sd_CI	summary_sd_CI
uptake_plots	uptake_plots
verbose_timecourse_output	verbose_timecourse_output
verbose_timepoint_output	verbose_timepoint_output
vol_tp	vol_tp
woods_CI_plot	woods_CI_plot
