Isodar-Adjusted, Abundance-Independent Niche Breadth


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Documentation for package ‘isoniche’ version 1.1.0

Help Pages

check_coverage Sampling coverage of each species and habitat
community_to_long Convert a community matrix to long format
fit_isodars Fit isodars
group_sites Group nearby sites into sampling units
iai Isodar-adjusted inequality (IAI)
iai_curve Niche breadth as a function of total abundance
isoderr Bootstrap uncertainty of the isodar-adjusted inequality
moorea_fish Reef fishes of Moorea in three habitats
niche_breadth Density-independent and density-dependent niche breadth
pairwise_niche Niche breadth indices from pairwise isodar parameters
plot.iai_curve Plot niche breadth curves
plot.niche_breadth Plot niche breadth against abundance
print.summary.niche_breadth Summarise niche breadth results and their diagnostics
radius_sensitivity Sensitivity of niche breadth to the grouping radius
simulate_isodars Simulate abundances in habitats linked by isodars
summary.niche_breadth Summarise niche breadth results and their diagnostics